Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4173	Mtap1b	microtubule-associated protein 1 B	13	13 51.0 cM	17755
Mm.4173	Ddx26	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26	14		18130
Gene Ontology	ATP binding | ATP dependent helicase activity | extracellular space | nucleic acid binding
Human Homolog	DDX26[DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 152 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGATGCAAG (4) 11.4 0.0114 P8 Cb GC ACCTTTTTAG (3) 8.2 0.0082 P8 Cb GC GAATTCAAAG (9) 8.2 0.0082 P8 Cb GC ACTTCAATAT (2) 6.5 0.0065 P8 Cb GC GAATTCAAAA (4) 4.9 0.0049 P8 Cb GC CGCCCGCCCG (3) 3.3 0.0033 P8 Cb GC GGTTCTCAGT (3) 3.3 0.0033 P8 Cb GC AAACCAGAGC (7) 1.6 0.0016 P8 Cb GC ACTCATTTTA (3) 1.6 0.0016 P8 Cb GC ATCAGGAGTG (2) 1.6 0.0016 P8 Cb GC CCCCGCCGCG (4) 1.6 0.0016 P8 Cb GC GAGACTGTTC (6) 1.6 0.0016 P8 Cb GC TTTAATTTTT (7) 1.6 0.0016 Cb medulloblastoma GTGATGCAAG (4) 27.7 0.0277 Cb medulloblastoma CGCCCGCCCG (3) 4.6 0.0046 Cb medulloblastoma GAATTCAAAG (9) 4.6 0.0046 Cb medulloblastoma ACCTTTTTAG (3) 2.3 0.0023 Cb medulloblastoma AGGTAAAAGA (4) 2.3 0.0023 Cb medulloblastoma CACTCACGCA (2) 2.3 0.0023 Cb medulloblastoma GAATTCAAAA (4) 2.3 0.0023 P8 GC+1d culture CGCCCGCCCG (3) 29.7 0.0297 P8 GC+1d culture GTGATGCAAG (4) 27.4 0.0274 P8 GC+1d culture GAATTCAAAG (9) 9.1 0.0091 P8 GC+1d culture GAATTCAAAA (4) 4.6 0.0046 P8 GC+1d culture ACCTTTTTAG (3) 3.4 0.0034 P8 GC+1d culture CGGGAAAGCA (5) 3.4 0.0034 P8 GC+1d culture ACTTCAATAT (2) 1.1 0.0011 P8 GC+1d culture ATCAGGAGTG (2) 1.1 0.0011 P8 GC+1d culture CCCCGCCGCG (4) 1.1 0.0011 P8 GC+1d culture GAGACTGTTC (6) 1.1 0.0011 P8 GC+1d culture TTTAATTTTT (7) 1.1 0.0011 P8 GC+SHH+1d culture CGCCCGCCCG (3) 35.1 0.0351 P8 GC+SHH+1d culture GTGATGCAAG (4) 23.4 0.0234 P8 GC+SHH+1d culture GAATTCAAAG (9) 9.4 0.0094 P8 GC+SHH+1d culture ACCTTTTTAG (3) 4.7 0.0047 P8 GC+SHH+1d culture ACTTCAATAT (2) 4.7 0.0047 P8 GC+SHH+1d culture GTCAACATAG (2) 4.7 0.0047 P8 GC+SHH+1d culture ATCAGGAGTG (2) 3.5 0.0035 P8 GC+SHH+1d culture CCCCGCCGCG (4) 2.3 0.0023 P8 GC+SHH+1d culture GAGACTGTTC (6) 2.3 0.0023 P8 GC+SHH+1d culture GGTTCTCAGT (3) 2.3 0.0023 P8 GC+SHH+1d culture ACCTCAATAT (3) 1.2 0.0012 P8 GC+SHH+1d culture CGGGAAAGCA (5) 1.2 0.0012 3T3 fibroblasts AAACCAGAGC (7) 3.5 0.0035 3T3 fibroblasts CGCCCGCCCG (3) 3.5 0.0035 E15 cortex CGCCCGCCCG (3) 188 0.188 E15 cortex GTGATGCAAG (4) 14.8 0.0148 E15 cortex AAACCAGAGC (7) 9.9 0.0099 E15 cortex CGGGAAAGCA (5) 4.9 0.0049 E15 cortex GAATTCAAAA (4) 4.9 0.0049 E15 cortex GAATTCAAAG (9) 4.9 0.0049 P1 cortex CGCCCGCCCG (3) 95.5 0.0955 P1 cortex ACTTCAATAT (2) 36.4 0.0364 P1 cortex ATCAGGAGTG (2) 22.7 0.0227 P1 cortex AAACCAGAGC (7) 18.2 0.0182 P1 cortex GGTTCTCAGT (3) 13.6 0.0136 P1 cortex GTGATGCAAG (4) 13.6 0.0136 P1 cortex ACCTCAATAT (3) 4.5 0.0045 P1 cortex CGGGAAAGCA (5) 4.5 0.0045 P1 cortex GAATTCAAAG (9) 4.5 0.0045 Hypothalamus GTGATGCAAG (4) 56.1 0.0561 Hypothalamus ACTTCAATAT (2) 3.6 0.0036 Hypothalamus CGCCCGCCCG (3) 3.6 0.0036 Hypothalamus ACTCATTTTA (3) 1.8 0.0018 Hypothalamus CGGGAAAGCA (5) 1.8 0.0018 Hypothalamus GGTTCTCAGT (3) 1.8 0.0018 E12.5 retina GAATTCAAAG (9) 9.4 0.0094 E12.5 retina CGCCCGCCCG (3) 7.5 0.0075 E12.5 retina ACTTCAATAT (2) 5.6 0.0056 E12.5 retina GGTTCTCAGT (3) 5.6 0.0056 E12.5 retina GTGATGCAAG (4) 5.6 0.0056 E12.5 retina AGGTAAAAGA (4) 3.8 0.0038 E12.5 retina CAGTCTACTT (2) 3.8 0.0038 E12.5 retina GAGACTGTTC (6) 3.8 0.0038 E12.5 retina GTCAACATAG (2) 3.8 0.0038 E12.5 retina ACCTCAATAT (3) 1.9 0.0019 E12.5 retina ACCTTTTTAG (3) 1.9 0.0019 E14.5 retina GTGATGCAAG (4) 16.4 0.0164 E14.5 retina CGGGAAAGCA (5) 1.8 0.0018 E14.5 retina GAATTCAAAG (9) 1.8 0.0018 E16.5 retina GTGATGCAAG (4) 9.1 0.0091 E16.5 retina GAATTCAAAG (9) 5.4 0.0054 E16.5 retina ACCTTTTTAG (3) 1.8 0.0018 E16.5 retina CACTCACGCA (2) 1.8 0.0018 E16.5 retina CGGGAAAGCA (5) 1.8 0.0018 E16.5 retina GTCAACATAG (2) 1.8 0.0018 E18.5 retina GTGATGCAAG (4) 29.1 0.0291 E18.5 retina CGCCCGCCCG (3) 5.5 0.0055 E18.5 retina ACCTTTTTAG (3) 3.6 0.0036 E18.5 retina ACTCATTTTA (3) 1.8 0.0018 E18.5 retina GGTTCTCAGT (3) 1.8 0.0018 P0.5 retina ACCTTTTTAG (3) 9.8 0.0098 P0.5 retina GTGATGCAAG (4) 5.9 0.0059 P0.5 retina ACTTCAATAT (2) 3.9 0.0039 P0.5 retina CGCCCGCCCG (3) 3.9 0.0039 P0.5 retina GAATTCAAAG (9) 2 0.002 P0.5 retina GAGACTGTTC (6) 2 0.002 P0.5 retina GGTTCTCAGT (3) 2 0.002 P2.5 retina GTGATGCAAG (4) 19.4 0.0194 P2.5 retina CGCCCGCCCG (3) 8.8 0.0088 P2.5 retina GAATTCAAAG (9) 8.8 0.0088 P2.5 retina ACCTTTTTAG (3) 5.3 0.0053 P2.5 retina GTCAACATAG (2) 5.3 0.0053 P2.5 retina ACTTCAATAT (2) 3.5 0.0035 P2.5 retina AGGTAAAAGA (4) 1.8 0.0018 P2.5 retina CACTCACGCA (2) 1.8 0.0018 P2.5 retina CGGGAAAGCA (5) 1.8 0.0018 P2.5 retina GAGACTGTTC (6) 1.8 0.0018 P2.5 retina TTTAATTTTT (7) 1.8 0.0018 P4.5 retina GTGATGCAAG (4) 41.6 0.0416 P4.5 retina CGCCCGCCCG (3) 9.9 0.0099 P4.5 retina GAATTCAAAG (9) 5.9 0.0059 P4.5 retina ACCTTTTTAG (3) 4 0.004 P4.5 retina ACTTCAATAT (2) 4 0.004 P4.5 retina CGGGAAAGCA (5) 2 0.002 P6.5 retina GTGATGCAAG (4) 40 0.04 P6.5 retina CGCCCGCCCG (3) 15 0.015 P6.5 retina ACCTTTTTAG (3) 6.7 0.0067 P6.5 retina GAATTCAAAG (9) 5 0.005 P6.5 retina CGGGAAAGCA (5) 3.3 0.0033 P6.5 retina GAATTCAAAA (4) 3.3 0.0033 P6.5 retina AAACCAGAGC (7) 1.7 0.0017 P6.5 retina ATCAGGAGTG (2) 1.7 0.0017 P6.5 retina TTTAATTTTT (7) 1.7 0.0017 P10.5 crx- retina GTGATGCAAG (4) 39 0.039 P10.5 crx- retina ACCTTTTTAG (3) 9.3 0.0093 P10.5 crx- retina CGCCCGCCCG (3) 5.6 0.0056 P10.5 crx- retina GAATTCAAAG (9) 3.7 0.0037 P10.5 crx- retina GAATTCAAAA (4) 1.9 0.0019 P10.5 crx- retina GTCAACATAG (2) 1.9 0.0019 P10.5 crx+ retina GTGATGCAAG (4) 75 0.075 P10.5 crx+ retina CGCCCGCCCG (3) 11.5 0.0115 P10.5 crx+ retina ACCTTTTTAG (3) 5.8 0.0058 P10.5 crx+ retina GGTTCTCAGT (3) 1.9 0.0019 Adult retinal GTGATGCAAG (4) 35.2 0.0352 Adult retinal CGCCCGCCCG (3) 22.2 0.0222 Adult retinal GAATTCAAAG (9) 5.6 0.0056 Adult retinal ACCTTTTTAG (3) 3.7 0.0037 Adult retinal ATCAGGAGTG (2) 3.7 0.0037 Adult retinal AAACCAGAGC (7) 1.9 0.0019 Adult retinal ACTTCAATAT (2) 1.9 0.0019 Adult retinal CACTCACGCA (2) 1.9 0.0019 Adult retinal CAGTCTACTT (2) 1.9 0.0019 Adult retinal GGTTCTCAGT (3) 1.9 0.0019 ONL GTGATGCAAG (4) 49.8 0.0498 ONL CGCCCGCCCG (3) 11.5 0.0115 ONL CGGGAAAGCA (5) 7.7 0.0077 ONL GAATTCAAAG (9) 5.7 0.0057 ONL ACCTTTTTAG (3) 3.8 0.0038 ONL ACTTCAATAT (2) 1.9 0.0019 ONL GGTTCTCAGT (3) 1.9 0.0019 ONL GTCAACATAG (2) 1.9 0.0019