Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41775	Apg3l	APG3 autophagy 3-like (S. cerevisiae)	16		67841
Gene Ontology	cytoplasmic ubiquitin ligase complex | protein modification | ubiquitin-like conjugating enzyme activity
Human Homolog	APG3L[APG3 autophagy 3-like (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTCAAA (13) 9.8 0.0098 P8 Cb GC TTTTCTCTTC (7) 4.9 0.0049 P8 Cb GC CTGAAGTGAT (3) 1.6 0.0016 Cb medulloblastoma GTGGCTCAAA (13) 6.9 0.0069 Cb medulloblastoma TTTTCTCTTC (7) 2.3 0.0023 P8 GC+1d culture GTGGCTCAAA (13) 13.7 0.0137 P8 GC+1d culture TTTTCTCTTC (7) 6.8 0.0068 P8 GC+1d culture CTGAAGTGAT (3) 4.6 0.0046 P8 GC+SHH+1d culture GTGGCTCAAA (13) 7 0.007 P8 GC+SHH+1d culture CTGAAGTGAT (3) 3.5 0.0035 P8 GC+SHH+1d culture TTTTCTCTTC (7) 3.5 0.0035 3T3 fibroblasts GTGGCTCAAA (13) 10.5 0.0105 3T3 fibroblasts CTGAAGTGAT (3) 7 0.007 E15 cortex GTGGCTCAAA (13) 19.8 0.0198 E15 cortex CTGAAGTGAT (3) 4.9 0.0049 P1 cortex GTGGCTCAAA (13) 18.2 0.0182 P1 cortex CTGAAGTGAT (3) 4.5 0.0045 Hypothalamus GTGGCTCAAA (13) 5.4 0.0054 Hypothalamus TTTTCTCTTC (7) 1.8 0.0018 E12.5 retina GTGGCTCAAA (13) 11.3 0.0113 E12.5 retina CTGAAGTGAT (3) 1.9 0.0019 E12.5 retina TTTTCTCTTC (7) 1.9 0.0019 E14.5 retina GTGGCTCAAA (13) 18.2 0.0182 E14.5 retina TTTTCTCTTC (7) 1.8 0.0018 E16.5 retina GTGGCTCAAA (13) 9.1 0.0091 E16.5 retina TTTTCTCTTC (7) 3.6 0.0036 E16.5 retina CTGAAGTGAT (3) 1.8 0.0018 E18.5 retina GTGGCTCAAA (13) 5.5 0.0055 E18.5 retina CTGAAGTGAT (3) 1.8 0.0018 P0.5 retina GTGGCTCAAA (13) 17.7 0.0177 P0.5 retina CTGAAGTGAT (3) 2 0.002 P0.5 retina TTTTCTCTTC (7) 2 0.002 P2.5 retina GTGGCTCAAA (13) 10.6 0.0106 P2.5 retina CTGAAGTGAT (3) 1.8 0.0018 P2.5 retina TTTTCTCTTC (7) 1.8 0.0018 P4.5 retina GTGGCTCAAA (13) 7.9 0.0079 P6.5 retina GTGGCTCAAA (13) 11.7 0.0117 P6.5 retina CTGAAGTGAT (3) 1.7 0.0017 P6.5 retina TTTTCTCTTC (7) 1.7 0.0017 P10.5 crx- retina CTGAAGTGAT (3) 3.7 0.0037 P10.5 crx- retina GTGGCTCAAA (13) 3.7 0.0037 P10.5 crx+ retina CTGAAGTGAT (3) 9.6 0.0096 P10.5 crx+ retina GTGGCTCAAA (13) 7.7 0.0077 Adult retinal CTGAAGTGAT (3) 3.7 0.0037 Adult retinal GTGGCTCAAA (13) 1.9 0.0019 Adult retinal TTTTCTCTTC (7) 1.9 0.0019 ONL GTGGCTCAAA (13) 5.7 0.0057 ONL CTGAAGTGAT (3) 1.9 0.0019 ONL TTTTCTCTTC (7) 1.9 0.0019