Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41923	Rpl18	ribosomal protein L18	6		19899
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL18[ribosomal protein L18]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ATCCGAAAGA (4) 71.8 0.0718 P8 Cb GC GACAAAAAAA (15) 6.5 0.0065 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GACAAAAAAA (15) 11.6 0.0116 Cb medulloblastoma ATCCGAAAGA (4) 9.2 0.0092 Cb medulloblastoma GAAGAAAACA (9) 2.3 0.0023 Cb medulloblastoma GATCTTAAAC (2) 2.3 0.0023 Cb medulloblastoma GTCCGAAAGA (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ATCCGAAAGA (4) 79.9 0.0799 P8 GC+1d culture GACAAAAAAA (15) 9.1 0.0091 P8 GC+1d culture GTCCGAAAGA (2) 2.3 0.0023 P8 GC+1d culture GATCTTAAAC (2) 1.1 0.0011 P8 GC+1d culture TCTGGATCCT (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture ATCCGAAAGA (4) 83.1 0.0831 P8 GC+SHH+1d culture GACAAAAAAA (15) 5.9 0.0059 P8 GC+SHH+1d culture ATGGCGCCTC (4) 4.7 0.0047 P8 GC+SHH+1d culture TCTGGATCCT (3) 2.3 0.0023 P8 GC+SHH+1d culture AACAACCTCT 1.2 0.0012 P8 GC+SHH+1d culture GAAGAAAACA (9) 1.2 0.0012 3T3 fibroblasts ATCCGAAAGA (4) 94.6 0.0946 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts ATGGCGCCTC (4) 7 0.007 3T3 fibroblasts AACAACCTCT 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ATCCGAAAGA (4) 64.3 0.0643 E15 cortex AGCCGAACCA 4.9 0.0049 E15 cortex GAAGAAAACA (9) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex ATCCGAAAGA (4) 77.3 0.0773 P1 cortex GAAGAAAACA (9) 4.5 0.0045 P1 cortex GACAAAAAAA (15) 4.5 0.0045 P1 cortex TTAAGTCTTT (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus ATCCGAAAGA (4) 36.2 0.0362 Hypothalamus GACAAAAAAA (15) 3.6 0.0036 Hypothalamus AACAACCTCT 1.8 0.0018 Hypothalamus GAAGAAAACA (9) 1.8 0.0018 Hypothalamus TTAAGTCTTT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ATCCGAAAGA (4) 103.3 0.1033 E12.5 retina GAAGAAAACA (9) 5.6 0.0056 E12.5 retina GATGATGAAA (5) 3.8 0.0038 E12.5 retina ATGGCGCCTC (4) 1.9 0.0019 E12.5 retina GACAAAAAAA (15) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATCCGAAAGA (4) 47.4 0.0474 E14.5 retina AGCCGAACCA 1.8 0.0018 E14.5 retina GAAGAAAACA (9) 1.8 0.0018 E14.5 retina GACAAAAAAA (15) 1.8 0.0018 E16.5 retina ATCCGAAAGA (4) 58 0.058 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAGAAAACA (9) 1.8 0.0018 E16.5 retina GATCTTAAAC (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ATCCGAAAGA (4) 32.7 0.0327 E18.5 retina GATGATGAAA (5) 7.3 0.0073 E18.5 retina GAAGAAAACA (9) 3.6 0.0036 E18.5 retina GACAAAAAAA (15) 1.8 0.0018 E18.5 retina GATCTTAAAC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina ATCCGAAAGA (4) 60.8 0.0608 P0.5 retina ATGGCGCCTC (4) 3.9 0.0039 P0.5 retina GATCTTAAAC (2) 2 0.002 P0.5 retina GTCCGAAAGA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina ATCCGAAAGA (4) 45.8 0.0458 P2.5 retina GATCTTAAAC (2) 1.8 0.0018 P2.5 retina GTCCGAAAGA (2) 1.8 0.0018 P2.5 retina TTAAGTCTTT (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ATCCGAAAGA (4) 37.6 0.0376 P4.5 retina GATCTTAAAC (2) 4 0.004 P4.5 retina GAAGAAAACA (9) 2 0.002 P4.5 retina GACAAAAAAA (15) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ATCCGAAAGA (4) 30 0.03 P6.5 retina GAAGAAAACA (9) 3.3 0.0033 P6.5 retina GACAAAAAAA (15) 1.7 0.0017 P6.5 retina TCTGGATCCT (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ATCCGAAAGA (4) 42.7 0.0427 P10.5 crx- retina AGCCGAACCA 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ATCCGAAAGA (4) 23.1 0.0231 P10.5 crx+ retina GACAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina ATGGCGCCTC (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ATCCGAAAGA (4) 24.1 0.0241 Adult retinal AACAACCTCT 1.9 0.0019 Adult retinal GACAAAAAAA (15) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ATCCGAAAGA (4) 26.8 0.0268 ONL GACAAAAAAA (15) 3.8 0.0038