Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41998	Ppp4c	protein phosphatase 4, catalytic subunit	7	7 F3	56420
Gene Ontology	hydrolase activity | manganese ion binding | nucleus | phosphoprotein phosphatase activity | protein serine/threonine phosphatase activity
Human Homolog	PPP4C[protein phosphatase 4 (formerly X), catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTTTTCAG (7) 3.3 0.0033 Cb medulloblastoma AAGTTTTCAG (7) 9.2 0.0092 Cb medulloblastoma AAAAAAAACA (13) 2.3 0.0023 Cb medulloblastoma GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture AAGTTTTCAG (7) 6.8 0.0068 P8 GC+1d culture TGCGACCTCC (2) 4.6 0.0046 P8 GC+1d culture GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture GATCAAGTGG (3) 1.1 0.0011 P8 GC+SHH+1d culture AAGTTTTCAG (7) 5.9 0.0059 P8 GC+SHH+1d culture GTGGATCACA (7) 3.5 0.0035 P8 GC+SHH+1d culture TGCGACCTCC (2) 1.2 0.0012 3T3 fibroblasts CAGCCAACGA (4) 3.5 0.0035 E15 cortex AAGTTTTCAG (7) 14.8 0.0148 E15 cortex GTGGATCACA (7) 4.9 0.0049 P1 cortex AAGTTTTCAG (7) 4.5 0.0045 Hypothalamus AAGTTTTCAG (7) 3.6 0.0036 Hypothalamus GTGGATCACA (7) 1.8 0.0018 Hypothalamus TGCGACCTCC (2) 1.8 0.0018 E12.5 retina AAGTTTTCAG (7) 11.3 0.0113 E12.5 retina GTGGATCACA (7) 3.8 0.0038 E14.5 retina AAGTTTTCAG (7) 29.2 0.0292 E14.5 retina GATCAAGTGG (3) 3.6 0.0036 E14.5 retina GTGGATCACA (7) 3.6 0.0036 E14.5 retina CAGCCAACGA (4) 1.8 0.0018 E16.5 retina AAGTTTTCAG (7) 19.9 0.0199 E16.5 retina GTGGATCACA (7) 5.4 0.0054 E16.5 retina AAAAAAAACA (13) 1.8 0.0018 E16.5 retina GATCAAGTGG (3) 1.8 0.0018 E18.5 retina AAGTTTTCAG (7) 3.6 0.0036 E18.5 retina AAAAAAAACA (13) 1.8 0.0018 P0.5 retina AAGTTTTCAG (7) 2 0.002 P0.5 retina GATCAAGTGG (3) 2 0.002 P0.5 retina GTGGATCACA (7) 2 0.002 P2.5 retina AAGTTTTCAG (7) 7 0.007 P2.5 retina GATCAAGTGG (3) 1.8 0.0018 P4.5 retina AAGTTTTCAG (7) 5.9 0.0059 P4.5 retina GTGGATCACA (7) 5.9 0.0059 P4.5 retina AAAAAAAACA (13) 2 0.002 P6.5 retina AAGTTTTCAG (7) 6.7 0.0067 P6.5 retina GTGGATCACA (7) 3.3 0.0033 P6.5 retina TGCGACCTCC (2) 1.7 0.0017 P10.5 crx- retina AAGTTTTCAG (7) 16.7 0.0167 P10.5 crx- retina CAGCCAACGA (4) 1.9 0.0019 P10.5 crx+ retina AAGTTTTCAG (7) 3.8 0.0038 P10.5 crx+ retina AAAAAAAACA (13) 1.9 0.0019 P10.5 crx+ retina GATCAAGTGG (3) 1.9 0.0019 P10.5 crx+ retina GTGGATCACA (7) 1.9 0.0019 Adult retinal AAGTTTTCAG (7) 5.6 0.0056 Adult retinal GTGGATCACA (7) 3.7 0.0037 Adult retinal TGCGACCTCC (2) 1.9 0.0019 ONL AAGTTTTCAG (7) 3.8 0.0038 ONL GTGGATCACA (7) 3.8 0.0038 ONL AAAAAAAACA (13) 1.9 0.0019