Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.42072
0610037P05Rik
RIKEN cDNA 0610037P05 gene
16
66086
Human Homolog
FLJ31153[hypothetical protein FLJ31153]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAGCAAGC
(
10
)
13.1
0.0131
P8 Cb GC
TTTTGAAAAA
(
6
)
3.3
0.0033
P8 Cb GC
GTGCTCCTGC
(
3
)
1.6
0.0016
P8 Cb GC
GTTTACTGCA
(
4
)
1.6
0.0016
P8 Cb GC
TTTGAAAAAA (
5
)
1.6
0.0016
Cb medulloblastoma
GGGAGCAAGC
(
10
)
6.9
0.0069
Cb medulloblastoma
GTGCTCCTGC
(
3
)
6.9
0.0069
Cb medulloblastoma
TTTGAAAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
GGGAGCAAGC
(
10
)
9.1
0.0091
P8 GC+1d culture
TTTTGAAAAA
(
6
)
4.6
0.0046
P8 GC+1d culture
GTGCTCCTGC
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGAGCAAGC
(
10
)
9.4
0.0094
P8 GC+SHH+1d culture
TTTTGAAAAA
(
6
)
8.2
0.0082
P8 GC+SHH+1d culture
TTTGAAAAAA (
5
)
4.7
0.0047
3T3 fibroblasts
GGGAGCAAGC
(
10
)
7
0.007
E15 cortex
GGGAGCAAGC
(
10
)
4.9
0.0049
P1 cortex
GGGAGCAAGC
(
10
)
9.1
0.0091
Hypothalamus
GGGAGCAAGC
(
10
)
16.3
0.0163
Hypothalamus
GTTTACTGCA
(
4
)
1.8
0.0018
Hypothalamus
TTTGAAAAAA (
5
)
1.8
0.0018
Hypothalamus
TTTTGAAAAA
(
6
)
1.8
0.0018
E12.5 retina
GGGAGCAAGC
(
10
)
5.6
0.0056
E12.5 retina
TTTTGAAAAA
(
6
)
3.8
0.0038
E12.5 retina
TTTGAAAAAA (
5
)
1.9
0.0019
E14.5 retina
GGGAGCAAGC
(
10
)
7.3
0.0073
E14.5 retina
TTTTGAAAAA
(
6
)
5.5
0.0055
E14.5 retina
TTTGAAAAAA (
5
)
1.8
0.0018
E16.5 retina
GGGAGCAAGC
(
10
)
9.1
0.0091
E16.5 retina
TTTTGAAAAA
(
6
)
9.1
0.0091
E16.5 retina
TTTGAAAAAA (
5
)
1.8
0.0018
E18.5 retina
GGGAGCAAGC
(
10
)
9.1
0.0091
E18.5 retina
TTTGAAAAAA (
5
)
3.6
0.0036
E18.5 retina
TTTTGAAAAA
(
6
)
3.6
0.0036
P0.5 retina
GGGAGCAAGC
(
10
)
11.8
0.0118
P0.5 retina
GTGCTCCTGC
(
3
)
2
0.002
P2.5 retina
GGGAGCAAGC
(
10
)
14.1
0.0141
P2.5 retina
TTTTGAAAAA
(
6
)
3.5
0.0035
P2.5 retina
TTTGAAAAAA (
5
)
1.8
0.0018
P4.5 retina
GGGAGCAAGC
(
10
)
9.9
0.0099
P4.5 retina
TTTTGAAAAA
(
6
)
9.9
0.0099
P4.5 retina
TTTGAAAAAA (
5
)
2
0.002
P6.5 retina
GGGAGCAAGC
(
10
)
8.3
0.0083
P6.5 retina
TTTTGAAAAA
(
6
)
3.3
0.0033
P6.5 retina
GTGCTCCTGC
(
3
)
1.7
0.0017
P6.5 retina
TTTGAAAAAA (
5
)
1.7
0.0017
P10.5 crx- retina
GGGAGCAAGC
(
10
)
9.3
0.0093
P10.5 crx- retina
TTTTGAAAAA
(
6
)
3.7
0.0037
P10.5 crx+ retina
GGGAGCAAGC
(
10
)
17.3
0.0173
Adult retinal
GGGAGCAAGC
(
10
)
11.1
0.0111
Adult retinal
GTGCTCCTGC
(
3
)
1.9
0.0019
Adult retinal
TTTGAAAAAA (
5
)
1.9
0.0019
Adult retinal
TTTTGAAAAA
(
6
)
1.9
0.0019
ONL
TTTGAAAAAA (
5
)
7.7
0.0077
ONL
GGGAGCAAGC
(
10
)
5.7
0.0057
ONL
TTTTGAAAAA
(
6
)
3.8
0.0038
