Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.42140
Zfp53
zinc finger protein 53
17
17 9.9 cM
24132
Gene Ontology
nucleic acid binding
|
protein binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CCTGCCTGGA (
5
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
CCTGCCTGGA (
5
)
6.9
0.0069
Cb medulloblastoma
AAAGAAGGTT (
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
CCTGCCTGGA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
CCTGCCTGGA (
5
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CCTGCCTGGA (
5
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CCTGCCTGGA (
5
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TCACAGGGCA
(
4
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TCACAGGGCA
(
4
)
3.6
0.0036
E14.5 retina
CCTGCCTGGA (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TCACAGGGCA
(
4
)
9.1
0.0091
E16.5 retina
CCTGCCTGGA (
5
)
5.4
0.0054
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TCACAGGGCA
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TCACAGGGCA
(
4
)
3.9
0.0039
P0.5 retina
CCTGCCTGGA (
5
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CCTGCCTGGA (
5
)
5.3
0.0053
P2.5 retina
AAAGAAGGTT (
2
)
1.8
0.0018
P2.5 retina
TCACAGGGCA
(
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CCTGCCTGGA (
5
)
4
0.004
P4.5 retina
TCACAGGGCA
(
4
)
4
0.004
P4.5 retina
TGGGCAAAAC (
4
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CCTGCCTGGA (
5
)
6.7
0.0067
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CCTGCCTGGA (
5
)
3.7
0.0037
P10.5 crx- retina
TGGGCAAAAC (
4
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CCTGCCTGGA (
5
)
5.8
0.0058
P10.5 crx+ retina
AAAGAAGGTT (
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCTGCCTGGA (
5
)
3.7
0.0037
Adult retinal
TGGGCAAAAC (
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CCTGCCTGGA (
5
)
5.7
0.0057
