Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42733	Prm1	protamine 1	16	16 3.4 cM	19118
Gene Ontology	cell differentiation | chromosome | chromosome condensation | chromosome organization and biogenesis (sensu Eukarya) | cytoplasm | DNA binding | mitotic chromosome condensation | nuclear organization and biogenesis | nucleosome | nucleus | nucleus | spermatid development | spermatogenesis
Human Homolog	PRM1[protamine 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCCCCACAC (5) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC TTCTTTTTTA (7) 1.6 0.0016 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TCCCCCACAC (5) 5.7 0.0057 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture TCCCCCACAC (5) 1.2 0.0012 P8 GC+SHH+1d culture TTCTTTTTTA (7) 1.2 0.0012 3T3 fibroblasts CCACCTGTCA (3) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TCCCCCACAC (5) 3.5 0.0035 E15 cortex GCTGTGGCAA (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TCCCCCACAC (5) 5.4 0.0054 Hypothalamus GCCAGATACT (3) 1.8 0.0018 Hypothalamus GCTGTGGCAA (5) 1.8 0.0018 E12.5 retina TCCCCCACAC (5) 13.1 0.0131 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TCCCCCACAC (5) 16.4 0.0164 E16.5 retina TCCCCCACAC (5) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TCCCCCACAC (5) 3.6 0.0036 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TCCCCCACAC (5) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GCCAGATACT (3) 2 0.002 P2.5 retina TCCCCCACAC (5) 8.8 0.0088 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCTGTGGCAA (5) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TCCCCCACAC (5) 9.9 0.0099 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TCCCCCACAC (5) 20 0.02 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina TCCCCCACAC (5) 11.1 0.0111 P10.5 crx+ retina TCCCCCACAC (5) 19.2 0.0192 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GCCAGATACT (3) 1.9 0.0019 P10.5 crx+ retina TTCTTTTTTA (7) 1.9 0.0019 Adult retinal TCCCCCACAC (5) 7.4 0.0074 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GCCAGATACT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTCTTTTTTA (7) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GCTGTGGCAA (5) 1.9 0.0019