Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42767	Rps17	ribosomal protein S17	7		20068
Gene Ontology	cytosolic small ribosomal subunit (sensu Eukarya) | protein biosynthesis | structural constituent of ribosome
Human Homolog	RPS17[ribosomal protein S17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 141 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACAGTGG (3) 84.8 0.0848 P8 Cb GC AATTTCAAAA (2) 78.3 0.0783 P8 Cb GC TTGGCGGGTC 4.9 0.0049 P8 Cb GC AATTTTTAAA (9) 3.3 0.0033 P8 Cb GC CCAACTGTAG (2) 3.3 0.0033 P8 Cb GC GGCCGCGTTC (2) 3.3 0.0033 P8 Cb GC TATTTCAAAA (14) 3.3 0.0033 P8 Cb GC AATTTCAAAG (2) 1.6 0.0016 Cb medulloblastoma AATTTCAAAA (2) 60.1 0.0601 Cb medulloblastoma AAAACAGTGG (3) 27.7 0.0277 Cb medulloblastoma AATTTTTAAA (9) 4.6 0.0046 Cb medulloblastoma TATTTCAAAA (14) 4.6 0.0046 Cb medulloblastoma CCAACTGTAG (2) 2.3 0.0023 P8 GC+1d culture AAAACAGTGG (3) 103.9 0.1039 P8 GC+1d culture AATTTCAAAA (2) 71.9 0.0719 P8 GC+1d culture TTGGCGGGTC 5.7 0.0057 P8 GC+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+1d culture AATTTCATAA (2) 1.1 0.0011 P8 GC+1d culture AGTTTCAAAA (3) 1.1 0.0011 P8 GC+1d culture CCAACTGTAG (2) 1.1 0.0011 P8 GC+1d culture GATTTCAAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture AATTTCAAAA (2) 101.9 0.1019 P8 GC+SHH+1d culture AAAACAGTGG (3) 76.1 0.0761 P8 GC+SHH+1d culture TTGGCGGGTC 5.9 0.0059 P8 GC+SHH+1d culture AATTTCACAA (2) 2.3 0.0023 P8 GC+SHH+1d culture CCAACTGTAG (2) 2.3 0.0023 P8 GC+SHH+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+SHH+1d culture AATTTTTAAA (9) 1.2 0.0012 3T3 fibroblasts AAAACAGTGG (3) 70.1 0.0701 3T3 fibroblasts CCAACTGTAG (2) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AATTTCAAAA (2) 7 0.007 3T3 fibroblasts GGCCGCGTTC (2) 3.5 0.0035 3T3 fibroblasts TTGGCGGGTC 3.5 0.0035 E15 cortex AAAACAGTGG (3) 39.6 0.0396 E15 cortex AATTTCAAAA (2) 24.7 0.0247 E15 cortex GGCCGCGTTC (2) 19.8 0.0198 E15 cortex AATTTCAGAA (4) 4.9 0.0049 E15 cortex CTGCTCTGTG (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AAAACAGTGG (3) 86.4 0.0864 P1 cortex AATTTCAAAA (2) 36.4 0.0364 Hypothalamus AATTTCAAAA (2) 29 0.029 Hypothalamus AAAACAGTGG (3) 19.9 0.0199 Hypothalamus TTGGCGGGTC 5.4 0.0054 Hypothalamus TATTTCAAAA (14) 3.6 0.0036 Hypothalamus AATTTCATAA (2) 1.8 0.0018 Hypothalamus CCAACTGTAG (2) 1.8 0.0018 Hypothalamus GGCCGCGTTC (2) 1.8 0.0018 E12.5 retina AATTTCAAAA (2) 253.4 0.2534 E12.5 retina AAAACAGTGG (3) 187.7 0.1877 E12.5 retina CCAACTGTAG (2) 9.4 0.0094 E12.5 retina TTGGCGGGTC 7.5 0.0075 E12.5 retina AGTTTCAAAA (3) 1.9 0.0019 E14.5 retina AATTTCAAAA (2) 173.1 0.1731 E14.5 retina AAAACAGTGG (3) 116.6 0.1166 E14.5 retina CCAACTGTAG (2) 16.4 0.0164 E14.5 retina TATTTCAAAA (14) 5.5 0.0055 E14.5 retina AATTTTTAAA (9) 3.6 0.0036 E14.5 retina AATTTCAAAC 1.8 0.0018 E14.5 retina AGTTTCAAAA (3) 1.8 0.0018 E14.5 retina GGCCGCGTTC (2) 1.8 0.0018 E14.5 retina GTGGTACACG 1.8 0.0018 E16.5 retina AAAACAGTGG (3) 182.9 0.1829 E16.5 retina AATTTCAAAA (2) 163 0.163 E16.5 retina CCAACTGTAG (2) 25.4 0.0254 E16.5 retina AATTTCAAAC 1.8 0.0018 E16.5 retina AATTTCAGAA (4) 1.8 0.0018 E16.5 retina GGCCGCGTTC (2) 1.8 0.0018 E16.5 retina GTGGTACACG 1.8 0.0018 E16.5 retina TATTTCAAAA (14) 1.8 0.0018 E16.5 retina TTGGTTTCCT (4) 1.8 0.0018 E18.5 retina AATTTCAAAA (2) 120.1 0.1201 E18.5 retina AAAACAGTGG (3) 38.2 0.0382 E18.5 retina CCAACTGTAG (2) 12.7 0.0127 E18.5 retina AATTTCAAAC 1.8 0.0018 E18.5 retina AATTTCAGAA (4) 1.8 0.0018 E18.5 retina AGTTTCAAAA (3) 1.8 0.0018 E18.5 retina TATTTCAAAA (14) 1.8 0.0018 E18.5 retina TTGGCGGGTC 1.8 0.0018 P0.5 retina AAAACAGTGG (3) 111.9 0.1119 P0.5 retina AATTTCAAAA (2) 51 0.051 P0.5 retina TTGGCGGGTC 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AATTTCAAAC 2 0.002 P0.5 retina AATTTCAGAA (4) 2 0.002 P0.5 retina CCAACTGTAG (2) 2 0.002 P0.5 retina GATTTCAAAA (6) 2 0.002 P2.5 retina AATTTCAAAA (2) 117.9 0.1179 P2.5 retina AAAACAGTGG (3) 54.6 0.0546 P2.5 retina CCAACTGTAG (2) 5.3 0.0053 P2.5 retina TATTTCAAAA (14) 3.5 0.0035 P2.5 retina TTGGCGGGTC 3.5 0.0035 P2.5 retina AATTTCATAA (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTGGTTTCCT (4) 1.8 0.0018 P4.5 retina AATTTCAAAA (2) 77.3 0.0773 P4.5 retina AAAACAGTGG (3) 51.5 0.0515 P4.5 retina CCAACTGTAG (2) 4 0.004 P4.5 retina CTGCTCTGTG (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TATTTCAAAA (14) 2 0.002 P4.5 retina TTGGCGGGTC 2 0.002 P6.5 retina AATTTCAAAA (2) 78.4 0.0784 P6.5 retina AAAACAGTGG (3) 50 0.05 P6.5 retina TTGGTTTCCT (4) 6.7 0.0067 P6.5 retina CCAACTGTAG (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TTGGCGGGTC 3.3 0.0033 P6.5 retina AATTTCAAAC 1.7 0.0017 P6.5 retina GAGGGGAAGG (4) 1.7 0.0017 P6.5 retina TATTTCAAAA (14) 1.7 0.0017 P10.5 crx- retina AATTTCAAAA (2) 198.8 0.1988 P10.5 crx- retina AAAACAGTGG (3) 118.9 0.1189 P10.5 crx- retina TTGGTTTCCT (4) 16.7 0.0167 P10.5 crx- retina CCAACTGTAG (2) 5.6 0.0056 P10.5 crx- retina GATTTCAAAA (6) 5.6 0.0056 P10.5 crx+ retina AAAACAGTGG (3) 59.6 0.0596 P10.5 crx+ retina AATTTCAAAA (2) 50 0.05 P10.5 crx+ retina TTGGTTTCCT (4) 3.8 0.0038 P10.5 crx+ retina GTGGTACACG 1.9 0.0019 P10.5 crx+ retina TATTTCAAAA (14) 1.9 0.0019 Adult retinal AAAACAGTGG (3) 44.4 0.0444 Adult retinal GAGGGGAAGG (4) 16.7 0.0167 Adult retinal TTGGTTTCCT (4) 9.3 0.0093 Adult retinal AATTTCAAAA (2) 7.4 0.0074 Adult retinal AATTTCAAAG (2) 1.9 0.0019 Adult retinal AATTTTTAAA (9) 1.9 0.0019 Adult retinal CCAACTGTAG (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TATTTCAAAA (14) 1.9 0.0019 ONL AATTTCAAAA (2) 57.5 0.0575 ONL AAAACAGTGG (3) 24.9 0.0249 ONL GAGGGGAAGG (4) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TTGGTTTCCT (4) 5.7 0.0057 ONL CTGCTCTGTG (5) 3.8 0.0038 ONL AATTTCAAAG (2) 1.9 0.0019 ONL AATTTTTAAA (9) 1.9 0.0019 ONL GTGGTACACG 1.9 0.0019 ONL TATTTCAAAA (14) 1.9 0.0019