Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42829	Sepw1	selenoprotein W, muscle 1	7		20364
Gene Ontology	selenium binding
Human Homolog	SEPW1[selenoprotein W, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 172 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTCCAGGTG (2) 68.5 0.0685 P8 Cb GC GCTTAAAAAT (6) 9.8 0.0098 P8 Cb GC AAGGAAAGGC (5) 8.2 0.0082 P8 Cb GC GCTGCCTGTC (3) 4.9 0.0049 P8 Cb GC GACGCCAGGG (3) 3.3 0.0033 P8 Cb GC GTGGCTCGCC (2) 3.3 0.0033 P8 Cb GC TTCTTGGGGA (4) 3.3 0.0033 P8 Cb GC TTTTCAGTGT (7) 3.3 0.0033 P8 Cb GC ACAGGAAGGA (3) 1.6 0.0016 P8 Cb GC AGTTCCCCGG 1.6 0.0016 P8 Cb GC TTTCCAGGGT 1.6 0.0016 P8 Cb GC TTTTCCAGGT (2) 1.6 0.0016 Cb medulloblastoma TTTCCAGGTG (2) 104.1 0.1041 Cb medulloblastoma GCTTAAAAAT (6) 16.2 0.0162 Cb medulloblastoma GCTGCCTGTC (3) 6.9 0.0069 Cb medulloblastoma ACAGGAAGGA (3) 4.6 0.0046 Cb medulloblastoma GTGGCTCGCC (2) 4.6 0.0046 Cb medulloblastoma TGACATTTTA (7) 4.6 0.0046 Cb medulloblastoma GACGCCAGGG (3) 2.3 0.0023 Cb medulloblastoma TTCTTGGGGA (4) 2.3 0.0023 P8 GC+1d culture TTTCCAGGTG (2) 86.8 0.0868 P8 GC+1d culture ACAGGAAGGA (3) 17.1 0.0171 P8 GC+1d culture GCTTAAAAAT (6) 12.6 0.0126 P8 GC+1d culture TTCTTGGGGA (4) 9.1 0.0091 P8 GC+1d culture GACGCCAGGG (3) 5.7 0.0057 P8 GC+1d culture GTGGCTCGCC (2) 3.4 0.0034 P8 GC+1d culture TTTTCAGTGT (7) 3.4 0.0034 P8 GC+1d culture AAGGAAAGGC (5) 2.3 0.0023 P8 GC+1d culture GCTGCCTGTC (3) 2.3 0.0023 P8 GC+1d culture TTTTCCAGGT (2) 2.3 0.0023 P8 GC+1d culture AGTTCCCCGG 1.1 0.0011 P8 GC+1d culture TTTCCAGGGT 1.1 0.0011 P8 GC+SHH+1d culture TTTCCAGGTG (2) 69.1 0.0691 P8 GC+SHH+1d culture GCTTAAAAAT (6) 17.6 0.0176 P8 GC+SHH+1d culture ACAGGAAGGA (3) 7 0.007 P8 GC+SHH+1d culture AAGGAAAGGC (5) 3.5 0.0035 P8 GC+SHH+1d culture GACGCCAGGG (3) 3.5 0.0035 P8 GC+SHH+1d culture TTTTCAGTGT (7) 3.5 0.0035 P8 GC+SHH+1d culture GCTGCCTGTC (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCTCGCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCCAGGT (2) 1.2 0.0012 3T3 fibroblasts GACGCCAGGG (3) 14 0.014 3T3 fibroblasts TTTCCAGGTG (2) 10.5 0.0105 3T3 fibroblasts ACAGGAAGGA (3) 7 0.007 E15 cortex TTTCCAGGTG (2) 44.5 0.0445 E15 cortex ACAGGAAGGA (3) 9.9 0.0099 E15 cortex GACGCCAGGG (3) 4.9 0.0049 E15 cortex GTGGCTCGCC (2) 4.9 0.0049 E15 cortex TTCTTGGGGA (4) 4.9 0.0049 P1 cortex TTTCCAGGTG (2) 50 0.05 P1 cortex GACGCCAGGG (3) 9.1 0.0091 P1 cortex TTCTTGGGGA (4) 9.1 0.0091 P1 cortex ACAGGAAGGA (3) 4.5 0.0045 P1 cortex TTTCCCAGGT (2) 4.5 0.0045 P1 cortex TTTTCAGTGT (7) 4.5 0.0045 Hypothalamus TTTCCAGGTG (2) 121.4 0.1214 Hypothalamus ACAGGAAGGA (3) 12.7 0.0127 Hypothalamus GCTGCCTGTC (3) 7.2 0.0072 Hypothalamus GCTTAAAAAT (6) 7.2 0.0072 Hypothalamus TTCCAGGTGT (2) 5.4 0.0054 Hypothalamus AGTTCCCCGG 3.6 0.0036 Hypothalamus TTTCCCAGGT (2) 3.6 0.0036 Hypothalamus TTTACAGGTG (4) 1.8 0.0018 Hypothalamus TTTTCAGTGT (7) 1.8 0.0018 E12.5 retina TTTCCAGGTG (2) 69.5 0.0695 E12.5 retina AAGGAAAGGC (5) 9.4 0.0094 E12.5 retina TTCTTGGGGA (4) 7.5 0.0075 E12.5 retina GACGCCAGGG (3) 3.8 0.0038 E12.5 retina GCTTAAAAAT (6) 3.8 0.0038 E12.5 retina TTTTCCAGGT (2) 3.8 0.0038 E12.5 retina TTCCAGGTGT (2) 1.9 0.0019 E12.5 retina TTTACAGGTG (4) 1.9 0.0019 E12.5 retina TTTCCAGGGT 1.9 0.0019 E12.5 retina TTTTCAGTGT (7) 1.9 0.0019 E14.5 retina TTTCCAGGTG (2) 74.7 0.0747 E14.5 retina GCTTAAAAAT (6) 21.9 0.0219 E14.5 retina AAGGAAAGGC (5) 10.9 0.0109 E14.5 retina TTCTTGGGGA (4) 7.3 0.0073 E14.5 retina GCTGCCTGTC (3) 5.5 0.0055 E14.5 retina TTTTCCAGGT (2) 3.6 0.0036 E14.5 retina GACGCCAGGG (3) 1.8 0.0018 E14.5 retina TTTACAGGTG (4) 1.8 0.0018 E16.5 retina TTTCCAGGTG (2) 119.5 0.1195 E16.5 retina GCTTAAAAAT (6) 12.7 0.0127 E16.5 retina AAGGAAAGGC (5) 9.1 0.0091 E16.5 retina AGTTCCCCGG 7.2 0.0072 E16.5 retina GCTGCCTGTC (3) 7.2 0.0072 E16.5 retina TTCTTGGGGA (4) 5.4 0.0054 E16.5 retina ACAGGAAGGA (3) 3.6 0.0036 E16.5 retina GACGCCAGGG (3) 1.8 0.0018 E16.5 retina GTGGCTCGCC (2) 1.8 0.0018 E16.5 retina TTCCAGGTGT (2) 1.8 0.0018 E16.5 retina TTTACAGGTG (4) 1.8 0.0018 E16.5 retina TTTCCAGGGG (3) 1.8 0.0018 E18.5 retina TTTCCAGGTG (2) 121.9 0.1219 E18.5 retina GCTTAAAAAT (6) 20 0.02 E18.5 retina GCTGCCTGTC (3) 7.3 0.0073 E18.5 retina TTTCCAGGGG (3) 5.5 0.0055 E18.5 retina AAGGAAAGGC (5) 3.6 0.0036 E18.5 retina ACAGGAAGGA (3) 3.6 0.0036 E18.5 retina GACGCCAGGG (3) 1.8 0.0018 E18.5 retina TTCTTGGGGA (4) 1.8 0.0018 P0.5 retina TTTCCAGGTG (2) 74.6 0.0746 P0.5 retina GACGCCAGGG (3) 5.9 0.0059 P0.5 retina TTTTCAGTGT (7) 5.9 0.0059 P0.5 retina AAGGAAAGGC (5) 3.9 0.0039 P0.5 retina GCTTAAAAAT (6) 3.9 0.0039 P0.5 retina ACAGGAAGGA (3) 2 0.002 P0.5 retina GTGGCTCGCC (2) 2 0.002 P0.5 retina TTTCCAGGGG (3) 2 0.002 P2.5 retina TTTCCAGGTG (2) 112.6 0.1126 P2.5 retina AAGGAAAGGC (5) 10.6 0.0106 P2.5 retina GCTTAAAAAT (6) 10.6 0.0106 P2.5 retina TTCTTGGGGA (4) 7 0.007 P2.5 retina GACGCCAGGG (3) 5.3 0.0053 P2.5 retina ACAGGAAGGA (3) 3.5 0.0035 P2.5 retina GCTGCCTGTC (3) 1.8 0.0018 P2.5 retina TTCCAGGTGT (2) 1.8 0.0018 P2.5 retina TTTTCCAGGT (2) 1.8 0.0018 P4.5 retina TTTCCAGGTG (2) 97.1 0.0971 P4.5 retina AAGGAAAGGC (5) 13.9 0.0139 P4.5 retina TTCTTGGGGA (4) 9.9 0.0099 P4.5 retina GCTTAAAAAT (6) 5.9 0.0059 P4.5 retina GACGCCAGGG (3) 4 0.004 P4.5 retina GTGGCTCGCC (2) 2 0.002 P4.5 retina TGACATTTTA (7) 2 0.002 P4.5 retina TTTCCAGTGT (6) 2 0.002 P4.5 retina TTTCCCAGGT (2) 2 0.002 P6.5 retina TTTCCAGGTG (2) 83.4 0.0834 P6.5 retina TTCTTGGGGA (4) 15 0.015 P6.5 retina GCTTAAAAAT (6) 11.7 0.0117 P6.5 retina AAGGAAAGGC (5) 6.7 0.0067 P6.5 retina ACAGGAAGGA (3) 6.7 0.0067 P6.5 retina GACGCCAGGG (3) 5 0.005 P6.5 retina GTGGCTCGCC (2) 3.3 0.0033 P6.5 retina GCTGCCTGTC (3) 1.7 0.0017 P6.5 retina TTTCCAGTGT (6) 1.7 0.0017 P6.5 retina TTTTCAGTGT (7) 1.7 0.0017 P10.5 crx- retina TTTCCAGGTG (2) 50.2 0.0502 P10.5 crx- retina ACAGGAAGGA (3) 7.4 0.0074 P10.5 crx- retina GACGCCAGGG (3) 7.4 0.0074 P10.5 crx- retina AAGGAAAGGC (5) 5.6 0.0056 P10.5 crx- retina GCTGCCTGTC (3) 5.6 0.0056 P10.5 crx- retina GCTTAAAAAT (6) 5.6 0.0056 P10.5 crx- retina AGTTCCCCGG 3.7 0.0037 P10.5 crx- retina GTGGCTCGCC (2) 3.7 0.0037 P10.5 crx- retina TTCTTGGGGA (4) 1.9 0.0019 P10.5 crx- retina TTTCCAGTGT (6) 1.9 0.0019 P10.5 crx- retina TTTTCCAGGT (2) 1.9 0.0019 P10.5 crx+ retina TTTCCAGGTG (2) 75 0.075 P10.5 crx+ retina GTGGCTCGCC (2) 3.8 0.0038 P10.5 crx+ retina TTCTTGGGGA (4) 3.8 0.0038 P10.5 crx+ retina ACAGGAAGGA (3) 1.9 0.0019 P10.5 crx+ retina GACGCCAGGG (3) 1.9 0.0019 P10.5 crx+ retina GCTGCCTGTC (3) 1.9 0.0019 P10.5 crx+ retina TGACATTTTA (7) 1.9 0.0019 Adult retinal TTTCCAGGTG (2) 29.6 0.0296 Adult retinal ACAGGAAGGA (3) 7.4 0.0074 Adult retinal TTCTTGGGGA (4) 5.6 0.0056 Adult retinal GACGCCAGGG (3) 1.9 0.0019 Adult retinal GCTGCCTGTC (3) 1.9 0.0019 Adult retinal GCTTAAAAAT (6) 1.9 0.0019 Adult retinal TTTCCAGGGT 1.9 0.0019 Adult retinal TTTCCCAGGT (2) 1.9 0.0019 ONL TTTCCAGGTG (2) 46 0.046 ONL ACAGGAAGGA (3) 7.7 0.0077 ONL GTGGCTCGCC (2) 3.8 0.0038 ONL TTCTTGGGGA (4) 3.8 0.0038 ONL GACGCCAGGG (3) 1.9 0.0019 ONL GCTGCCTGTC (3) 1.9 0.0019 ONL GCTTAAAAAT (6) 1.9 0.0019 ONL TTTTCAGTGT (7) 1.9 0.0019