Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.42967
Map4k6
mitogen-activated protein kinase kinase kinase kinase 6
11
50932
Mm.42967
2700008L21Rik
RIKEN cDNA 2700008L21 gene
11
72547
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCACAAGGT (
3
)
73.4
0.0734
P8 Cb GC
GTGCTGAATG (
2
)
6.5
0.0065
Cb medulloblastoma
CCCACAAGGT (
3
)
13.9
0.0139
Cb medulloblastoma
GACCCAGCTC
(
3
)
4.6
0.0046
P8 GC+1d culture
CCCACAAGGT (
3
)
37.7
0.0377
P8 GC+SHH+1d culture
CCCACAAGGT (
3
)
42.2
0.0422
P8 GC+SHH+1d culture
GACCCAGCTC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGCTGAATG (
2
)
1.2
0.0012
3T3 fibroblasts
CCCACAAGGT (
3
)
119.2
0.1192
3T3 fibroblasts
GACCCAGCTC
(
3
)
3.5
0.0035
E15 cortex
CCCACAAGGT (
3
)
39.6
0.0396
E15 cortex
GACCCAGCTC
(
3
)
4.9
0.0049
P1 cortex
CCCACAAGGT (
3
)
13.6
0.0136
Hypothalamus
CCCACAAGGT (
3
)
16.3
0.0163
Hypothalamus
GACCCAGCTC
(
3
)
3.6
0.0036
E12.5 retina
CCCACAAGGT (
3
)
65.7
0.0657
E12.5 retina
GACCCAGCTC
(
3
)
1.9
0.0019
E14.5 retina
CCCACAAGGT (
3
)
14.6
0.0146
E16.5 retina
CCCACAAGGT (
3
)
43.5
0.0435
E18.5 retina
CCCACAAGGT (
3
)
18.2
0.0182
E18.5 retina
GACCCAGCTC
(
3
)
3.6
0.0036
P0.5 retina
CCCACAAGGT (
3
)
76.5
0.0765
P0.5 retina
GACCCAGCTC
(
3
)
5.9
0.0059
P0.5 retina
CACAAAACGG
(
2
)
2
0.002
P2.5 retina
CCCACAAGGT (
3
)
31.7
0.0317
P2.5 retina
GACCCAGCTC
(
3
)
3.5
0.0035
P4.5 retina
CCCACAAGGT (
3
)
21.8
0.0218
P6.5 retina
CCCACAAGGT (
3
)
28.3
0.0283
P10.5 crx- retina
CCCACAAGGT (
3
)
91
0.091
P10.5 crx- retina
CACAAAACGG
(
2
)
3.7
0.0037
P10.5 crx- retina
GACCCAGCTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
CCCACAAGGT (
3
)
25
0.025
P10.5 crx+ retina
CACAAAACGG
(
2
)
1.9
0.0019
Adult retinal
CCCACAAGGT (
3
)
18.5
0.0185
Adult retinal
CACAAAACGG
(
2
)
1.9
0.0019
Adult retinal
GACCCAGCTC
(
3
)
1.9
0.0019
ONL
CCCACAAGGT (
3
)
30.6
0.0306
ONL
GACCCAGCTC
(
3
)
1.9
0.0019
