Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43760	Spc18	signal peptidase complex	7		56529
Gene Ontology	endoplasmic reticulum | hydrolase activity | integral to membrane | membrane | microsome | peptidase activity | proteolysis and peptidolysis | serine-type peptidase activity | signal peptide processing
Human Homolog	SPC18[signal peptidase complex (18kD)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGCAAGA (4) 9.8 0.0098 P8 Cb GC GGCAGTCCCC (3) 6.5 0.0065 P8 Cb GC TGCACCGTGG (2) 6.5 0.0065 P8 Cb GC AGGGCACTGG (2) 1.6 0.0016 P8 Cb GC CACCCGCCCA 1.6 0.0016 P8 Cb GC GGGTGCCCCA (4) 1.6 0.0016 Cb medulloblastoma AGGGCACTGG (2) 16.2 0.0162 Cb medulloblastoma AGTTCAAACC 4.6 0.0046 Cb medulloblastoma GGCAGTCCCC (3) 4.6 0.0046 Cb medulloblastoma GGGTGCCCCA (4) 2.3 0.0023 Cb medulloblastoma TGCACCGTGG (2) 2.3 0.0023 P8 GC+1d culture AAAAGCAAGA (4) 10.3 0.0103 P8 GC+1d culture AGGGCACTGG (2) 9.1 0.0091 P8 GC+1d culture TGCACCGTGG (2) 9.1 0.0091 P8 GC+1d culture GGGTGCCCCA (4) 5.7 0.0057 P8 GC+1d culture AGTTCAAACC 1.1 0.0011 P8 GC+1d culture CAGAGCTGTG (5) 1.1 0.0011 P8 GC+SHH+1d culture TGCACCGTGG (2) 16.4 0.0164 P8 GC+SHH+1d culture AGGGCACTGG (2) 12.9 0.0129 P8 GC+SHH+1d culture GGGTGCCCCA (4) 9.4 0.0094 P8 GC+SHH+1d culture AGTTCAAACC 3.5 0.0035 P8 GC+SHH+1d culture AAAAGCAAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCCTACAGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCAGTCCCC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCACCGGGG 1.2 0.0012 3T3 fibroblasts AGGGCACTGG (2) 7 0.007 3T3 fibroblasts TGCACCGTGG (2) 7 0.007 3T3 fibroblasts GGGTGCCCCA (4) 3.5 0.0035 E15 cortex GGCAGTCCCC (3) 14.8 0.0148 E15 cortex AGGGCACTGG (2) 4.9 0.0049 E15 cortex TGCACCGTGG (2) 4.9 0.0049 P1 cortex AAAAGCAAGA (4) 4.5 0.0045 P1 cortex TGCACCGTGG (2) 4.5 0.0045 Hypothalamus AGGGCACTGG (2) 36.2 0.0362 Hypothalamus CAGAGCTGTG (5) 5.4 0.0054 Hypothalamus AAAAGCAAGA (4) 3.6 0.0036 Hypothalamus TGCACCGTGG (2) 1.8 0.0018 E12.5 retina AAAAGCAAGA (4) 9.4 0.0094 E12.5 retina AGGGCACTGG (2) 7.5 0.0075 E12.5 retina TGCACCGTGG (2) 7.5 0.0075 E12.5 retina GGGTGCCCCA (4) 5.6 0.0056 E12.5 retina GGCAGTCCCC (3) 3.8 0.0038 E12.5 retina CACCCGCCCA 1.9 0.0019 E14.5 retina AGGGCACTGG (2) 14.6 0.0146 E14.5 retina GCCTACAGAG (2) 7.3 0.0073 E14.5 retina GGGTGCCCCA (4) 7.3 0.0073 E14.5 retina TGCACCGTGG (2) 7.3 0.0073 E14.5 retina AAAAGCAAGA (4) 3.6 0.0036 E14.5 retina AGTTCAAACC 3.6 0.0036 E14.5 retina CAGAGCTGTG (5) 3.6 0.0036 E14.5 retina GGCAGTCCCC (3) 1.8 0.0018 E16.5 retina AGGGCACTGG (2) 10.9 0.0109 E16.5 retina AAAAGCAAGA (4) 9.1 0.0091 E16.5 retina GGGTGCCCCA (4) 9.1 0.0091 E16.5 retina TGCACCGTGG (2) 3.6 0.0036 E16.5 retina AGTTCAAACC 1.8 0.0018 E18.5 retina TGCACCGTGG (2) 9.1 0.0091 E18.5 retina AGGGCACTGG (2) 7.3 0.0073 E18.5 retina GGGTGCCCCA (4) 7.3 0.0073 E18.5 retina AAAAGCAAGA (4) 3.6 0.0036 E18.5 retina CACCCGCCCA 3.6 0.0036 E18.5 retina AGTTCAAACC 1.8 0.0018 P0.5 retina AAAAGCAAGA (4) 11.8 0.0118 P0.5 retina TGCACCGTGG (2) 9.8 0.0098 P0.5 retina GGCAGTCCCC (3) 5.9 0.0059 P0.5 retina AGGGCACTGG (2) 3.9 0.0039 P0.5 retina GGGTGCCCCA (4) 3.9 0.0039 P2.5 retina AAAAGCAAGA (4) 14.1 0.0141 P2.5 retina TGCACCGTGG (2) 8.8 0.0088 P2.5 retina AGGGCACTGG (2) 7 0.007 P2.5 retina GGGTGCCCCA (4) 5.3 0.0053 P2.5 retina GGCAGTCCCC (3) 1.8 0.0018 P4.5 retina AGGGCACTGG (2) 7.9 0.0079 P4.5 retina TGCACCGTGG (2) 5.9 0.0059 P4.5 retina GGGTGCCCCA (4) 4 0.004 P4.5 retina AAAAGCAAGA (4) 2 0.002 P4.5 retina AGTTCAAACC 2 0.002 P6.5 retina AAAAGCAAGA (4) 13.3 0.0133 P6.5 retina AGGGCACTGG (2) 5 0.005 P6.5 retina GGGTGCCCCA (4) 3.3 0.0033 P6.5 retina GGCAGTCCCC (3) 1.7 0.0017 P6.5 retina TGCACCGTGG (2) 1.7 0.0017 P10.5 crx- retina AGGGCACTGG (2) 27.9 0.0279 P10.5 crx- retina AGTTCAAACC 9.3 0.0093 P10.5 crx- retina GGGTGCCCCA (4) 9.3 0.0093 P10.5 crx- retina AAAAGCAAGA (4) 5.6 0.0056 P10.5 crx- retina TGCACCGTGG (2) 3.7 0.0037 P10.5 crx- retina CAGAGCTGTG (5) 1.9 0.0019 P10.5 crx+ retina AGGGCACTGG (2) 21.1 0.0211 P10.5 crx+ retina GGGTGCCCCA (4) 7.7 0.0077 P10.5 crx+ retina AAAAGCAAGA (4) 3.8 0.0038 P10.5 crx+ retina TGCACCGGGG 1.9 0.0019 P10.5 crx+ retina TGCACCGTGG (2) 1.9 0.0019 Adult retinal AGGGCACTGG (2) 18.5 0.0185 Adult retinal AAAAGCAAGA (4) 5.6 0.0056 Adult retinal GGCAGTCCCC (3) 5.6 0.0056 Adult retinal CACCCGCCCA 1.9 0.0019 Adult retinal GGGTGCCCCA (4) 1.9 0.0019 Adult retinal TGCACCGGGG 1.9 0.0019 ONL AAAAGCAAGA (4) 7.7 0.0077 ONL AGGGCACTGG (2) 5.7 0.0057 ONL GGCAGTCCCC (3) 1.9 0.0019