Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4383	Bin1	bridging integrator 1	18	18 B1 (18 14.0 cM)	30948
Gene Ontology	cell differentiation | cytoplasm | endocytosis | membrane | negative regulation of cell cycle | nucleus | protein binding
Human Homolog	BIN1[bridging integrator 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAGGGCGG (2) 3.3 0.0033 P8 Cb GC GCAGAGATGG (6) 1.6 0.0016 P8 Cb GC GGTGTGAATG (3) 1.6 0.0016 Cb medulloblastoma TTCAGGGCGG (2) 4.6 0.0046 Cb medulloblastoma CGGGCATCGG (2) 2.3 0.0023 Cb medulloblastoma GCAGAGATGG (6) 2.3 0.0023 P8 GC+1d culture TTCAGGGCGG (2) 14.8 0.0148 P8 GC+1d culture GTGGACAATG (4) 5.7 0.0057 P8 GC+1d culture CGGGCATCGG (2) 1.1 0.0011 P8 GC+1d culture GCAGAGATGG (6) 1.1 0.0011 P8 GC+1d culture GGTGTGAATG (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCAGGGCGG (2) 5.9 0.0059 P8 GC+SHH+1d culture CGGGCATCGG (2) 4.7 0.0047 3T3 fibroblasts TTCAGGGCGG (2) 14 0.014 3T3 fibroblasts CGGGCATCGG (2) 3.5 0.0035 3T3 fibroblasts GCAGAGATGG (6) 3.5 0.0035 E15 cortex TTCAGGGCGG (2) 4.9 0.0049 P1 cortex TTCAGGGCGG (2) 13.6 0.0136 P1 cortex GTGGACAATG (4) 9.1 0.0091 P1 cortex CGGGCATCGG (2) 4.5 0.0045 Hypothalamus TTCAGGGCGG (2) 7.2 0.0072 Hypothalamus CGGGCATCGG (2) 3.6 0.0036 Hypothalamus GGTGTGAAGG (7) 1.8 0.0018 E12.5 retina GCAGAGATGG (6) 3.8 0.0038 E12.5 retina GGTGTGAATG (3) 3.8 0.0038 E12.5 retina TTCAGGGCGG (2) 3.8 0.0038 E12.5 retina CGGGCATCGG (2) 1.9 0.0019 E12.5 retina GTGGACAATG (4) 1.9 0.0019 E14.5 retina TTCAGGGCGG (2) 9.1 0.0091 E14.5 retina CGGGCATCGG (2) 5.5 0.0055 E14.5 retina GCAGAGATGG (6) 1.8 0.0018 E14.5 retina GGTGTGAATG (3) 1.8 0.0018 E16.5 retina TTCAGGGCGG (2) 9.1 0.0091 E16.5 retina GGTGTGAATG (3) 5.4 0.0054 E16.5 retina GCAGAGATGG (6) 3.6 0.0036 E16.5 retina CGGGCATCGG (2) 1.8 0.0018 E18.5 retina GGTGTGAATG (3) 5.5 0.0055 E18.5 retina TTCAGGGCGG (2) 3.6 0.0036 E18.5 retina GCAGAGATGG (6) 1.8 0.0018 P0.5 retina TTCAGGGCGG (2) 19.6 0.0196 P0.5 retina GCAGAGATGG (6) 3.9 0.0039 P0.5 retina GGTGTGAATG (3) 2 0.002 P0.5 retina GTGGACAATG (4) 2 0.002 P2.5 retina TTCAGGGCGG (2) 15.8 0.0158 P2.5 retina CGGGCATCGG (2) 3.5 0.0035 P2.5 retina GGTGTGAATG (3) 3.5 0.0035 P2.5 retina GCAGAGATGG (6) 1.8 0.0018 P4.5 retina TTCAGGGCGG (2) 19.8 0.0198 P4.5 retina CGGGCATCGG (2) 5.9 0.0059 P6.5 retina TTCAGGGCGG (2) 53.4 0.0534 P6.5 retina CGGGCATCGG (2) 13.3 0.0133 P6.5 retina GCAGAGATGG (6) 6.7 0.0067 P6.5 retina GGTGTGAAGG (7) 3.3 0.0033 P10.5 crx- retina TTCAGGGCGG (2) 26 0.026 P10.5 crx- retina CGGGCATCGG (2) 5.6 0.0056 P10.5 crx- retina GCAGAGATGG (6) 5.6 0.0056 P10.5 crx- retina GGTGTGAATG (3) 5.6 0.0056 P10.5 crx- retina GGTGTGAAGG (7) 1.9 0.0019 P10.5 crx- retina GTGGACAATG (4) 1.9 0.0019 P10.5 crx+ retina TTCAGGGCGG (2) 32.7 0.0327 P10.5 crx+ retina CGGGCATCGG (2) 19.2 0.0192 P10.5 crx+ retina GCAGAGATGG (6) 7.7 0.0077 P10.5 crx+ retina GGTGTGAAGG (7) 1.9 0.0019 P10.5 crx+ retina GGTGTGAATG (3) 1.9 0.0019 P10.5 crx+ retina GTGGACAATG (4) 1.9 0.0019 Adult retinal TTCAGGGCGG (2) 31.5 0.0315 Adult retinal GCAGAGATGG (6) 27.8 0.0278 Adult retinal GGTGTGAAGG (7) 3.7 0.0037 Adult retinal CGGGCATCGG (2) 1.9 0.0019 Adult retinal GTGGACAATG (4) 1.9 0.0019 ONL GCAGAGATGG (6) 19.2 0.0192 ONL CGGGCATCGG (2) 5.7 0.0057 ONL TTCAGGGCGG (2) 5.7 0.0057 ONL GGTGTGAATG (3) 3.8 0.0038 ONL GGTGTGAAGG (7) 1.9 0.0019