Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44075	D1Mgi29	DNA Segment, Chr 1, Mouse Genome Informatics 29	1		96931
Mm.44075	Fndc5	fibronectin type III domain containing 5	4		384061
Gene Ontology	integral to membrane | protein targeting
Human Homolog	FNDC5[fibronectin type III domain containing 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAGATGG (7) 9.8 0.0098 P8 Cb GC TTTATTTTTA (6) 4.9 0.0049 P8 Cb GC GGGTGAGGGT (8) 1.6 0.0016 P8 Cb GC GGTACCCCCA (2) 1.6 0.0016 Cb medulloblastoma GGTACCCCCA (2) 16.2 0.0162 Cb medulloblastoma GGGTGAGGGT (8) 4.6 0.0046 Cb medulloblastoma TAAGGTAGGA (2) 2.3 0.0023 Cb medulloblastoma TTTATTTTTA (6) 2.3 0.0023 P8 GC+1d culture GGGTGAGGGT (8) 14.8 0.0148 P8 GC+1d culture TTTATTTTTA (6) 4.6 0.0046 P8 GC+1d culture AAGGAGATGG (7) 2.3 0.0023 P8 GC+1d culture GGTACCCCCA (2) 2.3 0.0023 P8 GC+1d culture CTTTGATGAT (7) 1.1 0.0011 P8 GC+SHH+1d culture GGGTGAGGGT (8) 8.2 0.0082 P8 GC+SHH+1d culture TTTATTTTTA (6) 7 0.007 P8 GC+SHH+1d culture GGTACCCCCA (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGGAGATGG (7) 1.2 0.0012 P8 GC+SHH+1d culture CTTTGATGAT (7) 1.2 0.0012 P8 GC+SHH+1d culture GCTGAGGCTA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTGCTTGCA (4) 1.2 0.0012 3T3 fibroblasts GGGTGAGGGT (8) 3.5 0.0035 E15 cortex TTTATTTTTA (6) 4.9 0.0049 P1 cortex GGGTGAGGGT (8) 9.1 0.0091 Hypothalamus GGGTGAGGGT (8) 9.1 0.0091 Hypothalamus GGTACCCCCA (2) 1.8 0.0018 Hypothalamus TAAGGTAGGA (2) 1.8 0.0018 E12.5 retina GGGTGAGGGT (8) 9.4 0.0094 E12.5 retina CTTTGATGAT (7) 1.9 0.0019 E14.5 retina TTTATTTTTA (6) 5.5 0.0055 E16.5 retina GGGTGAGGGT (8) 1.8 0.0018 E16.5 retina TTTATTTTTA (6) 1.8 0.0018 E18.5 retina TTTATTTTTA (6) 7.3 0.0073 E18.5 retina AAGGAGATGG (7) 3.6 0.0036 E18.5 retina CTTTGATGAT (7) 3.6 0.0036 E18.5 retina GGGTGAGGGT (8) 1.8 0.0018 P0.5 retina GGGTGAGGGT (8) 9.8 0.0098 P0.5 retina TCTGCTTGCA (4) 2 0.002 P0.5 retina TTTATTTTTA (6) 2 0.002 P2.5 retina GGGTGAGGGT (8) 8.8 0.0088 P2.5 retina TTTATTTTTA (6) 3.5 0.0035 P2.5 retina CTTTGATGAT (7) 1.8 0.0018 P4.5 retina TTTATTTTTA (6) 11.9 0.0119 P4.5 retina GGGTGAGGGT (8) 5.9 0.0059 P4.5 retina CTTTGATGAT (7) 2 0.002 P6.5 retina GGGTGAGGGT (8) 20 0.02 P6.5 retina TTTATTTTTA (6) 5 0.005 P10.5 crx- retina GGGTGAGGGT (8) 14.9 0.0149 P10.5 crx- retina AAGGAGATGG (7) 1.9 0.0019 P10.5 crx- retina TAAGGTAGGA (2) 1.9 0.0019 P10.5 crx- retina TCTGCTTGCA (4) 1.9 0.0019 P10.5 crx+ retina GGGTGAGGGT (8) 1.9 0.0019 Adult retinal GGGTGAGGGT (8) 3.7 0.0037 Adult retinal GGTACCCCCA (2) 3.7 0.0037 Adult retinal GCTGAGGCTA (3) 1.9 0.0019 ONL GTTTGATGAT (2) 5.7 0.0057 ONL TTTATTTTTA (6) 1.9 0.0019