Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44101	Atp1a3	ATPase, Na+/K+ transporting, alpha 3 polypeptide	7	7 5.5 cM	232975
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | cytoplasm | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism | monovalent inorganic cation transport | monovalent inorganic cation transporter activity | nucleus | plasma membrane | potassium ion transport | sodium ion transport
Human Homolog	ATP1A3[ATPase, Na+/K+ transporting, alpha 3 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCCCCTCT (5) 1.6 0.0016 P8 Cb GC GGCATTTGCT (11) 1.6 0.0016 P8 Cb GC TACCCTCTCA 1.6 0.0016 Cb medulloblastoma GCCCCCCTCT (5) 13.9 0.0139 Cb medulloblastoma GGCATTTGCT (11) 4.6 0.0046 Cb medulloblastoma CCACACAGCC 2.3 0.0023 Cb medulloblastoma GGATTCCAAA (3) 2.3 0.0023 P8 GC+1d culture GCCCCCCTCT (5) 14.8 0.0148 P8 GC+1d culture AAAGAAAGAG (6) 2.3 0.0023 P8 GC+1d culture TACCCTCTCA 2.3 0.0023 P8 GC+1d culture GGCATTTGCT (11) 1.1 0.0011 P8 GC+1d culture GGGGCCGCCA (5) 1.1 0.0011 P8 GC+SHH+1d culture GCCCCCCTCT (5) 7 0.007 P8 GC+SHH+1d culture AAAGAAAGAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGATTCCAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGGCCGCCA (5) 1.2 0.0012 E15 cortex GCCCCCCTCT (5) 59.4 0.0594 E15 cortex GGCATTTGCT (11) 4.9 0.0049 P1 cortex GCCCCCCTCT (5) 72.7 0.0727 P1 cortex GGCATTTGCT (11) 9.1 0.0091 Hypothalamus GCCCCCCTCT (5) 12.7 0.0127 Hypothalamus GCCTACGGGC (2) 3.6 0.0036 Hypothalamus TACCCTCTCA 3.6 0.0036 Hypothalamus GGCATTTGCT (11) 1.8 0.0018 E12.5 retina GGCATTTGCT (11) 1.9 0.0019 E16.5 retina GGATTCCAAA (3) 1.8 0.0018 E16.5 retina GGCATTTGCT (11) 1.8 0.0018 E18.5 retina GCCCCCCTCT (5) 1.8 0.0018 P0.5 retina GCCCCCCTCT (5) 3.9 0.0039 P0.5 retina AAAGAAAGAG (6) 2 0.002 P0.5 retina TACCCTCTCA 2 0.002 P2.5 retina GCCCCCCTCT (5) 10.6 0.0106 P2.5 retina GGATTCCAAA (3) 1.8 0.0018 P2.5 retina TACCCTCTCA 1.8 0.0018 P4.5 retina GCCCCCCTCT (5) 13.9 0.0139 P4.5 retina GGATTCCAAA (3) 2 0.002 P4.5 retina GGGGCCGCCA (5) 2 0.002 P6.5 retina GCCCCCCTCT (5) 35 0.035 P6.5 retina GGCATTTGCT (11) 6.7 0.0067 P6.5 retina GCCTACGGGC (2) 1.7 0.0017 P10.5 crx- retina GCCCCCCTCT (5) 22.3 0.0223 P10.5 crx- retina AAAGAAAGAG (6) 1.9 0.0019 P10.5 crx- retina CCACACAGCC 1.9 0.0019 P10.5 crx- retina GGCATTTGCT (11) 1.9 0.0019 P10.5 crx+ retina GCCCCCCTCT (5) 28.8 0.0288 P10.5 crx+ retina GGCATTTGCT (11) 3.8 0.0038 Adult retinal GCCCCCCTCT (5) 53.7 0.0537 Adult retinal TACCCTCTCA 9.3 0.0093 Adult retinal CCACACAGCC 1.9 0.0019 Adult retinal GGATTCCAAA (3) 1.9 0.0019 Adult retinal GGCATTTGCT (11) 1.9 0.0019 ONL GCCCCCCTCT (5) 30.6 0.0306 ONL AAAGAAAGAG (6) 3.8 0.0038 ONL TACCCTCTCA 3.8 0.0038