Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4420	Ptpn21	protein tyrosine phosphatase, non-receptor type 21	12		24000
Gene Ontology	cysteine-type endopeptidase activity | cytoskeleton | hydrolase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | proteolysis and peptidolysis | receptor activity | structural molecule activity
Human Homolog	PTPN21[protein tyrosine phosphatase, non-receptor type 21]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAGATCAG (2) 4.9 0.0049 P8 Cb GC ACAACTGTGC 1.6 0.0016 P8 Cb GC CAAAGTGTTT (2) 1.6 0.0016 P8 Cb GC CTGAGGCAGC (4) 1.6 0.0016 P8 Cb GC GTAGAAAGTA (3) 1.6 0.0016 P8 GC+1d culture CTGAGGCAGC (4) 5.7 0.0057 P8 GC+1d culture AGCAGATCAG (2) 1.1 0.0011 P8 GC+1d culture CAGTGCTCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture CAAAGTGTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGAGGCAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture GTAGAAAGTA (3) 1.2 0.0012 3T3 fibroblasts CTGAGGCAGC (4) 10.5 0.0105 E15 cortex CTGAGGCAGC (4) 9.9 0.0099 P1 cortex CCTTGCTCTA 4.5 0.0045 Hypothalamus CTGAGGCAGC (4) 1.8 0.0018 E12.5 retina CTGAGGCAGC (4) 3.8 0.0038 E16.5 retina CTGAGGCAGC (4) 5.4 0.0054 E16.5 retina CAGTGCTCAC (2) 1.8 0.0018 E16.5 retina GTAGAAAGTA (3) 1.8 0.0018 E18.5 retina CAAAGTGTTT (2) 1.8 0.0018 P0.5 retina ACAACTGTGC 3.9 0.0039 P2.5 retina ACAACTGTGC 3.5 0.0035 P2.5 retina CAGTGCTCAC (2) 1.8 0.0018 P2.5 retina CTGAGGCAGC (4) 1.8 0.0018 P2.5 retina GTAGAAAGTA (3) 1.8 0.0018 P4.5 retina CTGAGGCAGC (4) 4 0.004 P4.5 retina ACAACTGTGC 2 0.002 P4.5 retina CAAAGTGTTT (2) 2 0.002 P4.5 retina CCTTGCTCTA 2 0.002 P6.5 retina ACAACTGTGC 8.3 0.0083 P6.5 retina CTGAGGCAGC (4) 5 0.005 P10.5 crx- retina ACAACTGTGC 1.9 0.0019 P10.5 crx- retina CTGAGGCAGC (4) 1.9 0.0019 P10.5 crx+ retina ACAACTGTGC 1.9 0.0019 P10.5 crx+ retina CAAAGTGTTT (2) 1.9 0.0019 P10.5 crx+ retina CTGAGGCAGC (4) 1.9 0.0019 Adult retinal ACAACTGTGC 3.7 0.0037 Adult retinal CAAAGTGTTT (2) 1.9 0.0019 Adult retinal CAGTGCTCAC (2) 1.9 0.0019