Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.44223
Commd8
COMM domain containing 8
5
5 40.0 cM
27784
Mm.44223
AA589385
expressed sequence AA589385
5
100540
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAAAAAAAA (
47
)
17.9
0.0179
P8 Cb GC
GTCTGAGGAA
(
3
)
4.9
0.0049
P8 Cb GC
AACAAGAAAA
(
4
)
1.6
0.0016
Cb medulloblastoma
AGAAAAAAAA (
47
)
53.2
0.0532
Cb medulloblastoma
GTCTGAGGAA
(
3
)
4.6
0.0046
P8 GC+1d culture
AGAAAAAAAA (
47
)
8
0.008
P8 GC+1d culture
GTCTGAGGAA
(
3
)
3.4
0.0034
P8 GC+1d culture
GGGAGCTCTG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AGAAAAAAAA (
47
)
14.1
0.0141
P8 GC+SHH+1d culture
GTCTGAGGAA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AACAAGAAAA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GACAAGAAAA
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCAAAGAA
(
3
)
1.2
0.0012
3T3 fibroblasts
GCCTCCCAAG
(
6
)
7
0.007
3T3 fibroblasts
AGAAAAAAAA (
47
)
3.5
0.0035
3T3 fibroblasts
GGGAGCTCTG
(
3
)
3.5
0.0035
E15 cortex
AGAAAAAAAA (
47
)
14.8
0.0148
E15 cortex
GGGAGCTCTG
(
3
)
4.9
0.0049
E15 cortex
GTCTGAGGAA
(
3
)
4.9
0.0049
P1 cortex
AGAAAAAAAA (
47
)
9.1
0.0091
P1 cortex
GTCTGAGGAA
(
3
)
9.1
0.0091
Hypothalamus
AGAAAAAAAA (
47
)
32.6
0.0326
Hypothalamus
GTCTGAGGAA
(
3
)
3.6
0.0036
Hypothalamus
TCACCAAGAA
(
5
)
1.8
0.0018
E12.5 retina
AGAAAAAAAA (
47
)
20.7
0.0207
E12.5 retina
GTCTGAGGAA
(
3
)
1.9
0.0019
E14.5 retina
AGAAAAAAAA (
47
)
20
0.02
E14.5 retina
GTCTGAGGAA
(
3
)
3.6
0.0036
E14.5 retina
AACAAGAAAA
(
4
)
1.8
0.0018
E14.5 retina
TGATAAAAAT
(
2
)
1.8
0.0018
E16.5 retina
AGAAAAAAAA (
47
)
10.9
0.0109
E16.5 retina
GTCTGAGGAA
(
3
)
5.4
0.0054
E18.5 retina
AGAAAAAAAA (
47
)
29.1
0.0291
E18.5 retina
GTCTGAGGAA
(
3
)
1.8
0.0018
E18.5 retina
TGATAAAAAT
(
2
)
1.8
0.0018
E18.5 retina
TTTCAAAGAA
(
3
)
1.8
0.0018
P0.5 retina
AGAAAAAAAA (
47
)
13.7
0.0137
P0.5 retina
GCCTCCCAAG
(
6
)
2
0.002
P0.5 retina
GTCTGAGGAA
(
3
)
2
0.002
P2.5 retina
AGAAAAAAAA (
47
)
17.6
0.0176
P2.5 retina
GTCTGAGGAA
(
3
)
7
0.007
P2.5 retina
TGATAAAAAT
(
2
)
3.5
0.0035
P2.5 retina
AACAAGAAAA
(
4
)
1.8
0.0018
P2.5 retina
GGGAGCTCTG
(
3
)
1.8
0.0018
P2.5 retina
TTTCAAAGAA
(
3
)
1.8
0.0018
P4.5 retina
AGAAAAAAAA (
47
)
31.7
0.0317
P4.5 retina
TCTACAGAGT
(
3
)
2
0.002
P6.5 retina
AGAAAAAAAA (
47
)
13.3
0.0133
P6.5 retina
GACAAGAAAA
(
7
)
1.7
0.0017
P6.5 retina
GTCTGAGGAA
(
3
)
1.7
0.0017
P6.5 retina
TCACCAAGAA
(
5
)
1.7
0.0017
P6.5 retina
TCTACAGAGT
(
3
)
1.7
0.0017
P6.5 retina
TGATAAAAAT
(
2
)
1.7
0.0017
P10.5 crx- retina
AGAAAAAAAA (
47
)
7.4
0.0074
P10.5 crx- retina
GTCTGAGGAA
(
3
)
3.7
0.0037
P10.5 crx+ retina
AGAAAAAAAA (
47
)
5.8
0.0058
P10.5 crx+ retina
TCTACAGAGT
(
3
)
1.9
0.0019
Adult retinal
AGAAAAAAAA (
47
)
5.6
0.0056
Adult retinal
GACAAGAAAA
(
7
)
1.9
0.0019
ONL
AGAAAAAAAA (
47
)
19.2
0.0192
ONL
GCCTCCCAAG
(
6
)
1.9
0.0019
