Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.443	Mthfd2	methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	6	6 35.15 cM	17768
Gene Ontology	catalytic activity | extracellular space | folic acid and derivative biosynthesis | hydrolase activity | magnesium ion binding | methenyltetrahydrofolate cyclohydrolase activity | methylenetetrahydrofolate dehydrogenase (NADP+) activity | mitochondrion | one-carbon compound metabolism | oxidoreductase activity
Human Homolog	MTHFD2[methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTCAGTTT (3) 3.3 0.0033 P8 Cb GC GCTTCAGCTT (3) 1.6 0.0016 Cb medulloblastoma GCTTCAGTTT (3) 9.2 0.0092 Cb medulloblastoma GCTTCAGCTT (3) 4.6 0.0046 P8 GC+1d culture GCTTCAGCTT (3) 3.4 0.0034 P8 GC+1d culture GCTTCAGTTT (3) 3.4 0.0034 P8 GC+1d culture CGCGCACACA (11) 1.1 0.0011 P8 GC+SHH+1d culture GCTTCAGTTT (3) 5.9 0.0059 P8 GC+SHH+1d culture GCTTCAGCTT (3) 2.3 0.0023 P8 GC+SHH+1d culture CTTTCAACCT (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTCTACAGA 1.2 0.0012 P8 GC+SHH+1d culture GGACCCACAC (2) 1.2 0.0012 3T3 fibroblasts GCTTCAGTTT (3) 14 0.014 3T3 fibroblasts GCTCTACAGA 7 0.007 3T3 fibroblasts CGCGCACACA (11) 3.5 0.0035 3T3 fibroblasts GGACCCACAC (2) 3.5 0.0035 E15 cortex GCTTCAGTTT (3) 9.9 0.0099 P1 cortex GCTCTACAGA 4.5 0.0045 Hypothalamus CGCGCACACA (11) 3.6 0.0036 Hypothalamus GCTTCAGCTT (3) 1.8 0.0018 Hypothalamus GGACCCACAC (2) 1.8 0.0018 E12.5 retina GCTTCAGTTT (3) 9.4 0.0094 E12.5 retina GGACCCACAC (2) 1.9 0.0019 E14.5 retina GCTTCAGCTT (3) 3.6 0.0036 E14.5 retina CGCGCACACA (11) 1.8 0.0018 E14.5 retina GCTCTACAGA 1.8 0.0018 E14.5 retina GCTTCAGTTT (3) 1.8 0.0018 E16.5 retina GCTTCAGTTT (3) 3.6 0.0036 E16.5 retina CTTTCAACCT (3) 1.8 0.0018 E16.5 retina GCTCTACAGA 1.8 0.0018 E16.5 retina GCTTCAGCTT (3) 1.8 0.0018 E18.5 retina GCTTCAGTTT (3) 7.3 0.0073 E18.5 retina CGCGCACACA (11) 1.8 0.0018 P0.5 retina GCTTCAGTTT (3) 13.7 0.0137 P0.5 retina GGACCCACAC (2) 2 0.002 P2.5 retina GCTTCAGTTT (3) 5.3 0.0053 P2.5 retina CGCGCACACA (11) 1.8 0.0018 P2.5 retina GGACCCACAC (2) 1.8 0.0018 P4.5 retina GCTTCAGTTT (3) 4 0.004 P4.5 retina GCTTCAGCTT (3) 2 0.002 P6.5 retina GCTTCAGTTT (3) 5 0.005 P6.5 retina GCTCTACAGA 1.7 0.0017 P6.5 retina GCTTCAGCTT (3) 1.7 0.0017 P10.5 crx- retina GCTTCAGTTT (3) 5.6 0.0056 P10.5 crx- retina GCTTCAGCTT (3) 3.7 0.0037 P10.5 crx- retina GGACCCACAC (2) 3.7 0.0037 P10.5 crx- retina CTTTCAACCT (3) 1.9 0.0019 P10.5 crx+ retina GCTTCAGTTT (3) 7.7 0.0077 P10.5 crx+ retina CTTTCAACCT (3) 3.8 0.0038 P10.5 crx+ retina GCTTCAGCTT (3) 3.8 0.0038 Adult retinal GCTTCAGTTT (3) 9.3 0.0093 Adult retinal GCTTCAGCTT (3) 3.7 0.0037 Adult retinal CTTTCAACCT (3) 1.9 0.0019 ONL GCTTCAGTTT (3) 7.7 0.0077 ONL GCTTCAGCTT (3) 1.9 0.0019 ONL GGACCCACAC (2) 1.9 0.0019