Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44416	Sgtb	small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	13		218544
Gene Ontology	biological_process unknown | cellular_component unknown | protein binding | protein heterodimerization activity | protein homodimerization activity
Human Homolog	SGTB[small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTCCTTTCT (3) 19.6 0.0196 P8 Cb GC ATGGCTCACA (25) 11.4 0.0114 P8 Cb GC AAATAAAAAA (11) 3.3 0.0033 P8 Cb GC ATTGATGAAT (2) 1.6 0.0016 P8 Cb GC CAAAGGGAAT (2) 1.6 0.0016 P8 Cb GC TGTGAGGCCC (2) 1.6 0.0016 Cb medulloblastoma ATGGCTCACA (25) 20.8 0.0208 Cb medulloblastoma GGTCCTTTCT (3) 11.6 0.0116 Cb medulloblastoma AAATAAAAAA (11) 4.6 0.0046 Cb medulloblastoma TGCTGATGCC (2) 2.3 0.0023 P8 GC+1d culture ATGGCTCACA (25) 33.1 0.0331 P8 GC+1d culture GGTCCTTTCT (3) 21.7 0.0217 P8 GC+1d culture TGTGAGGCCC (2) 2.3 0.0023 P8 GC+1d culture CAAAGGGAAT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGTCCTTTCT (3) 31.6 0.0316 P8 GC+SHH+1d culture ATGGCTCACA (25) 25.8 0.0258 P8 GC+SHH+1d culture AAATAAAAAA (11) 7 0.007 P8 GC+SHH+1d culture TGTGAGGCCC (2) 5.9 0.0059 P8 GC+SHH+1d culture CAAAGGGAAT (2) 1.2 0.0012 3T3 fibroblasts ATGGCTCACA (25) 31.5 0.0315 3T3 fibroblasts AGGTTTTCTA 3.5 0.0035 3T3 fibroblasts ATTGATGAAT (2) 3.5 0.0035 E15 cortex ATGGCTCACA (25) 29.7 0.0297 E15 cortex GGTCCTTTCT (3) 9.9 0.0099 E15 cortex TGTGAGGCCC (2) 4.9 0.0049 P1 cortex ATGGCTCACA (25) 13.6 0.0136 P1 cortex AAATAAAAAA (11) 4.5 0.0045 P1 cortex GGTCCTTTCT (3) 4.5 0.0045 Hypothalamus ATGGCTCACA (25) 43.5 0.0435 Hypothalamus AAATAAAAAA (11) 7.2 0.0072 Hypothalamus GGTCCTTTCT (3) 7.2 0.0072 Hypothalamus AGGTTTTCTA 1.8 0.0018 Hypothalamus CAAAGGGAAT (2) 1.8 0.0018 Hypothalamus TGTGAGGCCC (2) 1.8 0.0018 E12.5 retina ATGGCTCACA (25) 48.8 0.0488 E12.5 retina GGTCCTTTCT (3) 3.8 0.0038 E12.5 retina AAATAAAAAA (11) 1.9 0.0019 E14.5 retina ATGGCTCACA (25) 47.4 0.0474 E14.5 retina GGTCCTTTCT (3) 16.4 0.0164 E14.5 retina AAATAAAAAA (11) 5.5 0.0055 E14.5 retina CAAAGGGAAT (2) 5.5 0.0055 E16.5 retina ATGGCTCACA (25) 58 0.058 E16.5 retina CAAAGGGAAT (2) 34.4 0.0344 E16.5 retina GGTCCTTTCT (3) 10.9 0.0109 E16.5 retina AAATAAAAAA (11) 1.8 0.0018 E16.5 retina ATTGATGAAT (2) 1.8 0.0018 E16.5 retina TGCTGATGCC (2) 1.8 0.0018 E16.5 retina TGTGAGGCCC (2) 1.8 0.0018 E18.5 retina ATGGCTCACA (25) 38.2 0.0382 E18.5 retina GGTCCTTTCT (3) 18.2 0.0182 E18.5 retina AAATAAAAAA (11) 9.1 0.0091 E18.5 retina CAAAGGGAAT (2) 1.8 0.0018 E18.5 retina TGTGAGGCCC (2) 1.8 0.0018 P0.5 retina ATGGCTCACA (25) 35.3 0.0353 P0.5 retina GGTCCTTTCT (3) 15.7 0.0157 P0.5 retina TGTGAGGCCC (2) 3.9 0.0039 P2.5 retina ATGGCTCACA (25) 31.7 0.0317 P2.5 retina GGTCCTTTCT (3) 17.6 0.0176 P2.5 retina AAATAAAAAA (11) 5.3 0.0053 P2.5 retina TGTGAGGCCC (2) 3.5 0.0035 P2.5 retina CAAAGGGAAT (2) 1.8 0.0018 P4.5 retina ATGGCTCACA (25) 23.8 0.0238 P4.5 retina GGTCCTTTCT (3) 15.9 0.0159 P4.5 retina AAATAAAAAA (11) 5.9 0.0059 P4.5 retina CAAAGGGAAT (2) 2 0.002 P4.5 retina TGTGAGGCCC (2) 2 0.002 P6.5 retina ATGGCTCACA (25) 55 0.055 P6.5 retina GGTCCTTTCT (3) 11.7 0.0117 P6.5 retina AAATAAAAAA (11) 8.3 0.0083 P10.5 crx- retina ATGGCTCACA (25) 44.6 0.0446 P10.5 crx- retina GGTCCTTTCT (3) 16.7 0.0167 P10.5 crx- retina AAATAAAAAA (11) 3.7 0.0037 P10.5 crx- retina ATTGATGAAT (2) 1.9 0.0019 P10.5 crx+ retina ATGGCTCACA (25) 44.2 0.0442 P10.5 crx+ retina GGTCCTTTCT (3) 21.1 0.0211 P10.5 crx+ retina AGGTTTTCTA 3.8 0.0038 P10.5 crx+ retina AAATAAAAAA (11) 1.9 0.0019 Adult retinal ATGGCTCACA (25) 33.3 0.0333 Adult retinal GGTCCTTTCT (3) 13 0.013 Adult retinal AAATAAAAAA (11) 1.9 0.0019 Adult retinal AGGTTTTCTA 1.9 0.0019 ONL ATGGCTCACA (25) 49.8 0.0498 ONL GGTCCTTTCT (3) 9.6 0.0096 ONL AAATAAAAAA (11) 3.8 0.0038 ONL TGCTGATGCC (2) 1.9 0.0019