Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44463	Zhx3	zinc fingers and homeoboxes 3	2		320799
Mm.44463	Plcg1	phospholipase C, gamma 1	2	2 92.0 cM	18803
Gene Ontology	calcium ion binding | cellular_component unknown | embryonic development (sensu Mammalia) | hydrolase activity | intracellular signaling cascade | lipid catabolism | lipid metabolism | phosphoinositide phospholipase C activity | phospholipase C activity | protein binding | signal transducer activity | signal transduction
Human Homolog	PLCG1[phospholipase C, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC ATATGCAAAA (3) 6.5 0.0065 P8 Cb GC TCCAAAAAAA (8) 3.3 0.0033 P8 Cb GC AGGATGATTT (4) 1.6 0.0016 P8 Cb GC ATAAAAATAG (3) 1.6 0.0016 P8 Cb GC CCATCAGTGG (4) 1.6 0.0016 P8 Cb GC TCCTTAAAAA (5) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma TCCAAAAAAA (8) 6.9 0.0069 Cb medulloblastoma ATATGCAAAA (3) 4.6 0.0046 Cb medulloblastoma CAGCCACACC (5) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture TCCTTTTTCT (4) 5.7 0.0057 P8 GC+1d culture ATATGCAAAA (3) 4.6 0.0046 P8 GC+1d culture CCATCAGTGG (4) 4.6 0.0046 P8 GC+1d culture AGGATGATTT (4) 2.3 0.0023 P8 GC+1d culture ATAAAAATAG (3) 2.3 0.0023 P8 GC+1d culture TCCAAAAAAA (8) 2.3 0.0023 P8 GC+1d culture TCCTTAAAAA (5) 2.3 0.0023 P8 GC+1d culture CATAAAAAAA (13) 1.1 0.0011 P8 GC+1d culture TCCTTTTAAA (6) 1.1 0.0011 P8 GC+1d culture TCCTTTTTCA (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture ATATGCAAAA (3) 9.4 0.0094 P8 GC+SHH+1d culture CCATCAGTGG (4) 7 0.007 P8 GC+SHH+1d culture TCCAAAAAAA (8) 5.9 0.0059 P8 GC+SHH+1d culture TCCTTTTTCT (4) 3.5 0.0035 P8 GC+SHH+1d culture AGGATGATTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TCCTTTTAAA (6) 1.2 0.0012 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 3T3 fibroblasts CCATCAGTGG (4) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 E15 cortex ATAAAAATAG (3) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CCATCAGTGG (4) 27.3 0.0273 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 P1 cortex ATAAAAATAG (3) 4.5 0.0045 P1 cortex TCCTTAAAAA (5) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus CATAAAAAAA (13) 3.6 0.0036 Hypothalamus TCCAAAAAAA (8) 3.6 0.0036 Hypothalamus AGGATGATTT (4) 1.8 0.0018 Hypothalamus ATAAAAATAG (3) 1.8 0.0018 Hypothalamus ATATGCAAAA (3) 1.8 0.0018 Hypothalamus TCCTTTTAAA (6) 1.8 0.0018 Hypothalamus TCCTTTTTCT (4) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E12.5 retina ATATGCAAAA (3) 9.4 0.0094 E12.5 retina CCATCAGTGG (4) 5.6 0.0056 E12.5 retina AGGATGATTT (4) 1.9 0.0019 E12.5 retina ATAAAAATAG (3) 1.9 0.0019 E12.5 retina TCCTTAAAAA (5) 1.9 0.0019 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina ATATGCAAAA (3) 10.9 0.0109 E14.5 retina TCCTTTTTCT (4) 3.6 0.0036 E14.5 retina AACTGGGTTC (3) 1.8 0.0018 E14.5 retina AGGATGATTT (4) 1.8 0.0018 E14.5 retina ATAAAAATAG (3) 1.8 0.0018 E14.5 retina TCCTTTTAAA (6) 1.8 0.0018 E14.5 retina TCCTTTTTCA (2) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina AGGATGATTT (4) 1.8 0.0018 E16.5 retina ATATGCAAAA (3) 1.8 0.0018 E16.5 retina TCCTTTTTCA (2) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina TCCTTTTTCT (4) 9.1 0.0091 E18.5 retina ATATGCAAAA (3) 5.5 0.0055 E18.5 retina TCCAAAAAAA (8) 5.5 0.0055 E18.5 retina ATAAAAATAG (3) 1.8 0.0018 E18.5 retina CATAAAAAAA (13) 1.8 0.0018 E18.5 retina TCCTTAAAAA (5) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P0.5 retina CCATCAGTGG (4) 17.7 0.0177 P0.5 retina AACTGGGTTC (3) 3.9 0.0039 P0.5 retina TCCTTAAAAA (5) 3.9 0.0039 P0.5 retina ATATGCAAAA (3) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina ATATGCAAAA (3) 12.3 0.0123 P2.5 retina CCATCAGTGG (4) 5.3 0.0053 P2.5 retina TCCTTTTTCT (4) 3.5 0.0035 P2.5 retina TCCAAAAAAA (8) 1.8 0.0018 P2.5 retina TCCTTAAAAA (5) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina ATATGCAAAA (3) 7.9 0.0079 P4.5 retina TCCTTTTTCT (4) 5.9 0.0059 P4.5 retina TCCAAAAAAA (8) 4 0.004 P4.5 retina AGGATGATTT (4) 2 0.002 P4.5 retina CCATCAGTGG (4) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina ATATGCAAAA (3) 5 0.005 P6.5 retina TCCAAAAAAA (8) 3.3 0.0033 P6.5 retina ATAAAAATAG (3) 1.7 0.0017 P6.5 retina CAGCCACACC (5) 1.7 0.0017 P6.5 retina CATAAAAAAA (13) 1.7 0.0017 P6.5 retina CCATCAGTGG (4) 1.7 0.0017 P6.5 retina TCCTTAAAAA (5) 1.7 0.0017 P6.5 retina TCCTTTTAAA (6) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina AGGATGATTT (4) 1.9 0.0019 P10.5 crx- retina CCATCAGTGG (4) 1.9 0.0019 P10.5 crx- retina TCCTTTTTCT (4) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina ATATGCAAAA (3) 1.9 0.0019 P10.5 crx+ retina TCCTTTTTCT (4) 1.9 0.0019 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal ATATGCAAAA (3) 3.7 0.0037 Adult retinal CCATCAGTGG (4) 3.7 0.0037 Adult retinal TCCAAAAAAA (8) 3.7 0.0037 Adult retinal CAGCCACACC (5) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL ATATGCAAAA (3) 5.7 0.0057 ONL ATAAAAATAG (3) 1.9 0.0019 ONL CCATCAGTGG (4) 1.9 0.0019