Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45125	1300002C08Rik	RIKEN cDNA 1300002C08 gene	3		67472
Human Homolog	CHPPR[likely ortholog of chicken chondrocyte protein with a poly-proline region]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCTGCAT (29) 8.2 0.0082 P8 Cb GC AATGGCATCA (6) 1.6 0.0016 P8 Cb GC GTAAACTACT 1.6 0.0016 Cb medulloblastoma GCCTCTGCAT (29) 6.9 0.0069 Cb medulloblastoma AATGGCATCA (6) 2.3 0.0023 P8 GC+1d culture GCCTCTGCAT (29) 20.5 0.0205 P8 GC+1d culture AGTAAATATT 1.1 0.0011 P8 GC+1d culture GTAAACTACT 1.1 0.0011 P8 GC+SHH+1d culture GCCTCTGCAT (29) 9.4 0.0094 P8 GC+SHH+1d culture AATGGCATCA (6) 1.2 0.0012 P8 GC+SHH+1d culture AGTAAATATT 1.2 0.0012 3T3 fibroblasts AATGGCATCA (6) 7 0.007 3T3 fibroblasts GCCTCTGCAT (29) 7 0.007 E15 cortex GCCTCTGCAT (29) 39.6 0.0396 P1 cortex GCCTCTGCAT (29) 18.2 0.0182 Hypothalamus GCCTCTGCAT (29) 10.9 0.0109 E12.5 retina GCCTCTGCAT (29) 11.3 0.0113 E12.5 retina ATTTTTGTGT (3) 1.9 0.0019 E14.5 retina GCCTCTGCAT (29) 14.6 0.0146 E14.5 retina AATGGCATCA (6) 1.8 0.0018 E14.5 retina ATTTTTGTGT (3) 1.8 0.0018 E16.5 retina GCCTCTGCAT (29) 16.3 0.0163 E16.5 retina GTAAACTACT 1.8 0.0018 E18.5 retina GCCTCTGCAT (29) 9.1 0.0091 P0.5 retina GCCTCTGCAT (29) 23.6 0.0236 P2.5 retina GCCTCTGCAT (29) 31.7 0.0317 P4.5 retina GCCTCTGCAT (29) 19.8 0.0198 P6.5 retina GCCTCTGCAT (29) 21.7 0.0217 P6.5 retina AGTAAATATT 1.7 0.0017 P10.5 crx- retina GCCTCTGCAT (29) 27.9 0.0279 P10.5 crx- retina AGTAAATATT 1.9 0.0019 P10.5 crx+ retina GCCTCTGCAT (29) 32.7 0.0327 P10.5 crx+ retina AGTAAATATT 1.9 0.0019 Adult retinal GCCTCTGCAT (29) 33.3 0.0333 Adult retinal ATTTTTGTGT (3) 3.7 0.0037 ONL GCCTCTGCAT (29) 17.2 0.0172 ONL AATGGCATCA (6) 1.9 0.0019 ONL ATTTTTGTGT (3) 1.9 0.0019