Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.45506
Nkd2
naked cuticle 2 homolog (Drosophila)
13
72293
Gene Ontology
calcium ion binding
Human Homolog
NKD2[naked cuticle homolog 2 (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGTGCTGG (
64
)
8.2
0.0082
P8 Cb GC
GGGAAATTTC (
9
)
3.3
0.0033
P8 Cb GC
ATGCCTTCTT
(
6
)
1.6
0.0016
Cb medulloblastoma
ATGCCTTCTT
(
6
)
9.2
0.0092
Cb medulloblastoma
TGGGTGCTGG (
64
)
9.2
0.0092
Cb medulloblastoma
GGGGAAAAAA (
28
)
4.6
0.0046
P8 GC+1d culture
TGGGTGCTGG (
64
)
5.7
0.0057
P8 GC+1d culture
GGGAAATTTC (
9
)
2.3
0.0023
P8 GC+1d culture
GGGGAAAAAA (
28
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGGTGCTGG (
64
)
3.5
0.0035
P8 GC+SHH+1d culture
ATGCCTTCTT
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGAAATTTC (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGCTGCAGC (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCACCCAGT (
7
)
1.2
0.0012
3T3 fibroblasts
TGGGTGCTGG (
64
)
17.5
0.0175
3T3 fibroblasts
ATGCCTTCTT
(
6
)
3.5
0.0035
E15 cortex
TGGGTGCTGG (
64
)
14.8
0.0148
E15 cortex
GGGGAAAAAA (
28
)
4.9
0.0049
P1 cortex
TGGGTGCTGG (
64
)
13.6
0.0136
P1 cortex
ATGCCTTCTT
(
6
)
4.5
0.0045
Hypothalamus
TGGGTGCTGG (
64
)
9.1
0.0091
Hypothalamus
ATGCCTTCTT
(
6
)
7.2
0.0072
E12.5 retina
TGGGTGCTGG (
64
)
9.4
0.0094
E12.5 retina
ATGCCTTCTT
(
6
)
3.8
0.0038
E12.5 retina
GCAGGGCCAA (
3
)
1.9
0.0019
E12.5 retina
GGGGAAAAAA (
28
)
1.9
0.0019
E14.5 retina
TGGGTGCTGG (
64
)
54.7
0.0547
E14.5 retina
ATGCCTTCTT
(
6
)
3.6
0.0036
E14.5 retina
GAAAATGACA
3.6
0.0036
E14.5 retina
CTGCTGCAGC (
7
)
1.8
0.0018
E14.5 retina
GCAGGGCCAA (
3
)
1.8
0.0018
E16.5 retina
TGGGTGCTGG (
64
)
41.7
0.0417
E16.5 retina
ATGCCTTCTT
(
6
)
7.2
0.0072
E16.5 retina
GCCACCCAGT (
7
)
3.6
0.0036
E16.5 retina
GGGGAAAAAA (
28
)
1.8
0.0018
E18.5 retina
TGGGTGCTGG (
64
)
20
0.02
E18.5 retina
ATGCCTTCTT
(
6
)
3.6
0.0036
E18.5 retina
GGGGAAAAAA (
28
)
3.6
0.0036
P0.5 retina
TGGGTGCTGG (
64
)
11.8
0.0118
P2.5 retina
TGGGTGCTGG (
64
)
17.6
0.0176
P2.5 retina
ATGCCTTCTT
(
6
)
3.5
0.0035
P2.5 retina
CTGCTGCAGC (
7
)
1.8
0.0018
P4.5 retina
TGGGTGCTGG (
64
)
9.9
0.0099
P4.5 retina
ATGCCTTCTT
(
6
)
2
0.002
P4.5 retina
CTGCTGCAGC (
7
)
2
0.002
P6.5 retina
TGGGTGCTGG (
64
)
13.3
0.0133
P6.5 retina
GCCACCCAGT (
7
)
1.7
0.0017
P6.5 retina
GGGGAAAAAA (
28
)
1.7
0.0017
P10.5 crx- retina
TGGGTGCTGG (
64
)
20.4
0.0204
P10.5 crx- retina
ATGCCTTCTT
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGGGTGCTGG (
64
)
15.4
0.0154
P10.5 crx+ retina
ATGCCTTCTT
(
6
)
1.9
0.0019
P10.5 crx+ retina
GCAGGGCCAA (
3
)
1.9
0.0019
Adult retinal
TGGGTGCTGG (
64
)
13
0.013
Adult retinal
ATGCCTTCTT
(
6
)
1.9
0.0019
Adult retinal
GGGAAATTTC (
9
)
1.9
0.0019
ONL
TGGGTGCTGG (
64
)
40.2
0.0402
ONL
ATGCCTTCTT
(
6
)
7.7
0.0077
ONL
GAAAATGACA
1.9
0.0019
