Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.45725
Ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
15
74351
Mm.45725
3110082M05Rik
RIKEN cDNA 3110082M05 gene
15
73226
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATGAAAAAA (
6
)
3.3
0.0033
Cb medulloblastoma
GAAAATAAAC (
7
)
16.2
0.0162
Cb medulloblastoma
TATGAAAAAA (
6
)
9.2
0.0092
P8 GC+1d culture
TGCCTGTCTG (
6
)
5.7
0.0057
P8 GC+1d culture
GAAAATAAAC (
7
)
4.6
0.0046
P8 GC+1d culture
TATGAAAAAA (
6
)
4.6
0.0046
P8 GC+SHH+1d culture
GAAAATAAAC (
7
)
4.7
0.0047
P8 GC+SHH+1d culture
TATGAAAAAA (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GGCACGGGAA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCCTGTCTG (
6
)
1.2
0.0012
3T3 fibroblasts
GGCACGGGAA
(
3
)
17.5
0.0175
E15 cortex
GAAAATAAAC (
7
)
4.9
0.0049
E15 cortex
GGCACGGGAA
(
3
)
4.9
0.0049
Hypothalamus
GAAAATAAAC (
7
)
67
0.067
Hypothalamus
TATGAAAAAA (
6
)
12.7
0.0127
E12.5 retina
GAAAATAAAC (
7
)
5.6
0.0056
E12.5 retina
TATGAAAAAA (
6
)
3.8
0.0038
E12.5 retina
TGCCTGTCTG (
6
)
1.9
0.0019
E14.5 retina
GAAAATAAAC (
7
)
5.5
0.0055
E14.5 retina
TATGAAAAAA (
6
)
5.5
0.0055
E14.5 retina
TGCCTGTCTG (
6
)
1.8
0.0018
E16.5 retina
GAAAATAAAC (
7
)
5.4
0.0054
E16.5 retina
TGCCTGTCTG (
6
)
3.6
0.0036
E16.5 retina
TATGAAAAAA (
6
)
1.8
0.0018
E18.5 retina
TATGAAAAAA (
6
)
10.9
0.0109
E18.5 retina
GAAAATAAAC (
7
)
9.1
0.0091
P0.5 retina
TATGAAAAAA (
6
)
3.9
0.0039
P0.5 retina
GAAAATAAAC (
7
)
2
0.002
P0.5 retina
TGCCTGTCTG (
6
)
2
0.002
P2.5 retina
TATGAAAAAA (
6
)
7
0.007
P2.5 retina
TGCCTGTCTG (
6
)
5.3
0.0053
P2.5 retina
GAAAATAAAC (
7
)
3.5
0.0035
P4.5 retina
GAAAATAAAC (
7
)
15.9
0.0159
P4.5 retina
TATGAAAAAA (
6
)
5.9
0.0059
P4.5 retina
TGCCTGTCTG (
6
)
5.9
0.0059
P6.5 retina
GAAAATAAAC (
7
)
6.7
0.0067
P6.5 retina
TATGAAAAAA (
6
)
6.7
0.0067
P6.5 retina
TGCCTGTCTG (
6
)
3.3
0.0033
P10.5 crx- retina
GAAAATAAAC (
7
)
1.9
0.0019
P10.5 crx- retina
TGCCTGTCTG (
6
)
1.9
0.0019
P10.5 crx+ retina
TGCCTGTCTG (
6
)
5.8
0.0058
P10.5 crx+ retina
GAAAATAAAC (
7
)
3.8
0.0038
P10.5 crx+ retina
TATGAAAAAA (
6
)
3.8
0.0038
P10.5 crx+ retina
GGCACGGGAA
(
3
)
1.9
0.0019
Adult retinal
TATGAAAAAA (
6
)
3.7
0.0037
Adult retinal
TGCCTGTCTG (
6
)
1.9
0.0019
ONL
TATGAAAAAA (
6
)
9.6
0.0096
ONL
GAAAATAAAC (
7
)
1.9
0.0019
ONL
GGCACGGGAA
(
3
)
1.9
0.0019
ONL
TGCCTGTCTG (
6
)
1.9
0.0019
