Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4598	Bcan	brevican	3	3 42.7 cM	12032
Gene Ontology	cell adhesion | extracellular space | hyaluronic acid binding | sugar binding
Human Homolog	BCAN[brevican]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGCTGCCT (4) 4.9 0.0049 P8 Cb GC GAAAACAAAC (6) 1.6 0.0016 P8 Cb GC GGAGGAGGCT (3) 1.6 0.0016 Cb medulloblastoma GAAAACAAAC (6) 11.6 0.0116 Cb medulloblastoma GGAGGAGGCT (3) 6.9 0.0069 Cb medulloblastoma TCAGCTGCCT (4) 6.9 0.0069 P8 GC+1d culture GGAGGAGGCT (3) 3.4 0.0034 P8 GC+1d culture GAAAACAAAC (6) 1.1 0.0011 P8 GC+SHH+1d culture GGAGGAGGCT (3) 4.7 0.0047 P8 GC+SHH+1d culture GGGAAGAGGA (4) 1.2 0.0012 3T3 fibroblasts GGAGGAGGCT (3) 10.5 0.0105 3T3 fibroblasts TCAGCTGCCT (4) 3.5 0.0035 E15 cortex TCAGCTGCCT (4) 4.9 0.0049 P1 cortex TCAGCTGCCT (4) 4.5 0.0045 Hypothalamus GGAGGAGGCT (3) 7.2 0.0072 Hypothalamus TCAGCTGCCT (4) 3.6 0.0036 Hypothalamus CTTCCAGCCT (2) 1.8 0.0018 Hypothalamus GAAAACAAAC (6) 1.8 0.0018 Hypothalamus GGGAAGAGGA (4) 1.8 0.0018 E12.5 retina GGAGGAGGCT (3) 1.9 0.0019 E14.5 retina CTTCCAGCCT (2) 1.8 0.0018 E18.5 retina GGAGGAGGCT (3) 3.6 0.0036 E18.5 retina CTTCCAGCCT (2) 1.8 0.0018 P0.5 retina GGAGGAGGCT (3) 5.9 0.0059 P0.5 retina TCAGCTGCCT (4) 2 0.002 P2.5 retina GGAGGAGGCT (3) 5.3 0.0053 P4.5 retina GGAGGAGGCT (3) 2 0.002 P6.5 retina GGAGGAGGCT (3) 6.7 0.0067 P6.5 retina GGGAAGAGGA (4) 1.7 0.0017 P10.5 crx- retina GGAGGAGGCT (3) 3.7 0.0037 P10.5 crx+ retina GGAGGAGGCT (3) 3.8 0.0038 Adult retinal GGAGGAGGCT (3) 14.8 0.0148