Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.46397
3100002B05Rik
RIKEN cDNA 3100002B05 gene
11
68299
Mm.46397
BB162755
expressed sequence BB162755
11
104705
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCAGAGTCC
(
4
)
1.6
0.0016
Cb medulloblastoma
GCCAGAGTCC
(
4
)
4.6
0.0046
Cb medulloblastoma
CACTCACAGA
(
2
)
2.3
0.0023
P8 GC+1d culture
GCCAGAGTCC
(
4
)
4.6
0.0046
P8 GC+SHH+1d culture
GCCAGAGTCC
(
4
)
8.2
0.0082
P8 GC+SHH+1d culture
ACCCGGGCTG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CACTCACAGA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTCTGCAAG (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGAGCAT
(
4
)
1.2
0.0012
3T3 fibroblasts
GCCAGAGTCC
(
4
)
3.5
0.0035
E15 cortex
GCCAGAGTCC
(
4
)
4.9
0.0049
Hypothalamus
GTGGGAGCAT
(
4
)
3.6
0.0036
Hypothalamus
GCCAGAGTCC
(
4
)
1.8
0.0018
Hypothalamus
GCTCTGCAAG (
6
)
1.8
0.0018
E12.5 retina
TCTGAGAGAT (
3
)
7.5
0.0075
E12.5 retina
GCCAGAGTCC
(
4
)
1.9
0.0019
E14.5 retina
TCTGAGAGAT (
3
)
10.9
0.0109
E14.5 retina
GCCAGAGTCC
(
4
)
9.1
0.0091
E14.5 retina
GTGGGAGCAT
(
4
)
1.8
0.0018
E16.5 retina
GCCAGAGTCC
(
4
)
5.4
0.0054
E16.5 retina
TCTGAGAGAT (
3
)
5.4
0.0054
E16.5 retina
GCTCTGCAAG (
6
)
3.6
0.0036
E16.5 retina
GTGGGAGCAT
(
4
)
1.8
0.0018
E18.5 retina
GCCAGAGTCC
(
4
)
7.3
0.0073
E18.5 retina
TCTGAGAGAT (
3
)
7.3
0.0073
E18.5 retina
CACTCACAGA
(
2
)
3.6
0.0036
E18.5 retina
GTGGGAGCAT
(
4
)
1.8
0.0018
P0.5 retina
TCTGAGAGAT (
3
)
15.7
0.0157
P0.5 retina
GCTCTGCAAG (
6
)
2
0.002
P2.5 retina
GCCAGAGTCC
(
4
)
8.8
0.0088
P2.5 retina
TCTGAGAGAT (
3
)
5.3
0.0053
P4.5 retina
GCCAGAGTCC
(
4
)
5.9
0.0059
P4.5 retina
TCTGAGAGAT (
3
)
5.9
0.0059
P4.5 retina
ACCCGGGCTG
(
2
)
2
0.002
P4.5 retina
GTGGGAGCAT
(
4
)
2
0.002
P6.5 retina
GCCAGAGTCC
(
4
)
8.3
0.0083
P10.5 crx- retina
GCCAGAGTCC
(
4
)
7.4
0.0074
P10.5 crx- retina
GAAGCTCAGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCCAGAGTCC
(
4
)
9.6
0.0096
Adult retinal
GCCAGAGTCC
(
4
)
5.6
0.0056
Adult retinal
GAAGCTCAGT
(
2
)
3.7
0.0037
Adult retinal
GCTCTGCAAG (
6
)
3.7
0.0037
Adult retinal
ACCCGGGCTG
(
2
)
1.9
0.0019
ONL
CACTCACAGA
(
2
)
1.9
0.0019
ONL
GCCAGAGTCC
(
4
)
1.9
0.0019
