Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46418	2200003E03Rik	RIKEN cDNA 2200003E03 gene	3		81600
Gene Ontology	carbohydrate metabolism | catalytic activity | chitin binding | chitin catabolism | chitin metabolism | chitinase activity | extracellular | hydrolase activity | hydrolase activity, acting on glycosyl bonds | metabolism | polysaccharide catabolism
Human Homolog	CHIA[eosinophil chemotactic cytokine]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGATTCCC (2) 21.2 0.0212 P8 Cb GC GTATTGGCCT (3) 14.7 0.0147 P8 Cb GC ACACACAAGA (6) 4.9 0.0049 P8 Cb GC GGCCCAATGA (2) 3.3 0.0033 P8 Cb GC AGTGGTGATG (2) 1.6 0.0016 P8 Cb GC GTCCCTGGGA (9) 1.6 0.0016 P8 Cb GC GTGGGTTCCG (4) 1.6 0.0016 P8 Cb GC TGGTTTGTCT 1.6 0.0016 Cb medulloblastoma GAGGATTCCC (2) 27.7 0.0277 Cb medulloblastoma GTATTGGCCT (3) 6.9 0.0069 Cb medulloblastoma ACACACAAGA (6) 4.6 0.0046 Cb medulloblastoma AACTATTTGG (3) 2.3 0.0023 Cb medulloblastoma AATGGCTTTG (7) 2.3 0.0023 Cb medulloblastoma GAGCCCAGGC (3) 2.3 0.0023 Cb medulloblastoma GGCCCAATGA (2) 2.3 0.0023 P8 GC+1d culture GAGGATTCCC (2) 35.4 0.0354 P8 GC+1d culture ACACACAAGA (6) 9.1 0.0091 P8 GC+1d culture GTATTGGCCT (3) 8 0.008 P8 GC+1d culture GAGCCCAGGC (3) 2.3 0.0023 P8 GC+1d culture GGCCCAATGA (2) 2.3 0.0023 P8 GC+1d culture GGCTCCTGGG (10) 2.3 0.0023 P8 GC+1d culture AATGGCTTTG (7) 1.1 0.0011 P8 GC+1d culture GGGGCCCCTT (6) 1.1 0.0011 P8 GC+1d culture GTGGGTTCCG (4) 1.1 0.0011 P8 GC+1d culture TGGTTTGTCT 1.1 0.0011 P8 GC+SHH+1d culture GAGGATTCCC (2) 32.8 0.0328 P8 GC+SHH+1d culture GTATTGGCCT (3) 5.9 0.0059 P8 GC+SHH+1d culture ACACACAAGA (6) 4.7 0.0047 P8 GC+SHH+1d culture AACTATTTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCCCAATGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCCCTGGGA (9) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTTCCG (4) 1.2 0.0012 3T3 fibroblasts GAGGATTCCC (2) 21 0.021 3T3 fibroblasts ACACACAAGA (6) 3.5 0.0035 3T3 fibroblasts GGCCCAATGA (2) 3.5 0.0035 E15 cortex GAGGATTCCC (2) 34.6 0.0346 E15 cortex AACTATTTGG (3) 4.9 0.0049 E15 cortex GCTTCCTGGC (3) 4.9 0.0049 E15 cortex GGCCCAATGA (2) 4.9 0.0049 E15 cortex GTATTGGCCT (3) 4.9 0.0049 E15 cortex GTCCCTGGGA (9) 4.9 0.0049 P1 cortex GAGGATTCCC (2) 27.3 0.0273 P1 cortex GTATTGGCCT (3) 4.5 0.0045 Hypothalamus GAGGATTCCC (2) 41.7 0.0417 Hypothalamus GTATTGGCCT (3) 12.7 0.0127 Hypothalamus GGCCCAATGA (2) 5.4 0.0054 Hypothalamus AATGGCTTTG (7) 1.8 0.0018 Hypothalamus ACACACAAGA (6) 1.8 0.0018 Hypothalamus GTCCTGGGGA (5) 1.8 0.0018 Hypothalamus GTGGGTTCCG (4) 1.8 0.0018 Hypothalamus TGGTTTGTCT 1.8 0.0018 E12.5 retina GAGGATTCCC (2) 26.3 0.0263 E12.5 retina GTATTGGCCT (3) 13.1 0.0131 E12.5 retina GGCCCAATGA (2) 7.5 0.0075 E12.5 retina ACACACAAGA (6) 5.6 0.0056 E12.5 retina AAACTAAAGG (5) 1.9 0.0019 E12.5 retina GAGCCCAGGC (3) 1.9 0.0019 E12.5 retina GGGGCCCCTT (6) 1.9 0.0019 E14.5 retina GAGGATTCCC (2) 31 0.031 E14.5 retina ACACACAAGA (6) 5.5 0.0055 E14.5 retina GTATTGGCCT (3) 3.6 0.0036 E14.5 retina AACTATTTGG (3) 1.8 0.0018 E14.5 retina GGAAAGAACA (4) 1.8 0.0018 E14.5 retina GGGACACAGG 1.8 0.0018 E16.5 retina GAGGATTCCC (2) 45.3 0.0453 E16.5 retina GTATTGGCCT (3) 3.6 0.0036 E16.5 retina AAACTAAAGG (5) 1.8 0.0018 E16.5 retina ACACACAAGA (6) 1.8 0.0018 E16.5 retina GGCCCAATGA (2) 1.8 0.0018 E16.5 retina GTCCCTGGGA (9) 1.8 0.0018 E18.5 retina GAGGATTCCC (2) 43.7 0.0437 E18.5 retina GTATTGGCCT (3) 14.6 0.0146 E18.5 retina GTCCCTGGGA (9) 3.6 0.0036 E18.5 retina ACACACAAGA (6) 1.8 0.0018 E18.5 retina TGGTTTGTCT 1.8 0.0018 P0.5 retina GAGGATTCCC (2) 23.6 0.0236 P0.5 retina GTATTGGCCT (3) 9.8 0.0098 P0.5 retina ACACACAAGA (6) 2 0.002 P0.5 retina GCTTCCTGGC (3) 2 0.002 P0.5 retina GGGCCCTACC (3) 2 0.002 P2.5 retina GAGGATTCCC (2) 37 0.037 P2.5 retina ACACACAAGA (6) 3.5 0.0035 P2.5 retina GAGCCCAGGC (3) 1.8 0.0018 P2.5 retina GGCCCAATGA (2) 1.8 0.0018 P2.5 retina GGGACACAGG 1.8 0.0018 P2.5 retina GTATTGGCCT (3) 1.8 0.0018 P2.5 retina TGGGTTCCAG (5) 1.8 0.0018 P4.5 retina GAGGATTCCC (2) 35.7 0.0357 P4.5 retina GGCCCAATGA (2) 5.9 0.0059 P4.5 retina ACACACAAGA (6) 4 0.004 P4.5 retina GTATTGGCCT (3) 4 0.004 P4.5 retina GTGGGTTCCG (4) 4 0.004 P4.5 retina AACTATTTGG (3) 2 0.002 P4.5 retina AGTGGTGATG (2) 2 0.002 P4.5 retina GTCCCTGGGA (9) 2 0.002 P4.5 retina TGGTTTGTCT 2 0.002 P6.5 retina GAGGATTCCC (2) 23.3 0.0233 P6.5 retina GTATTGGCCT (3) 13.3 0.0133 P6.5 retina ACACACAAGA (6) 1.7 0.0017 P6.5 retina GGCCCAATGA (2) 1.7 0.0017 P6.5 retina GTGGGTTCCG (4) 1.7 0.0017 P10.5 crx- retina GAGGATTCCC (2) 27.9 0.0279 P10.5 crx- retina GGCCCAATGA (2) 9.3 0.0093 P10.5 crx- retina ACACACAAGA (6) 5.6 0.0056 P10.5 crx- retina AACTATTTGG (3) 1.9 0.0019 P10.5 crx- retina GGGCCCTACC (3) 1.9 0.0019 P10.5 crx+ retina GAGGATTCCC (2) 26.9 0.0269 P10.5 crx+ retina GGCCCAATGA (2) 9.6 0.0096 P10.5 crx+ retina ACACACAAGA (6) 3.8 0.0038 P10.5 crx+ retina GTATTGGCCT (3) 3.8 0.0038 P10.5 crx+ retina GGGCCCTACC (3) 1.9 0.0019 P10.5 crx+ retina GTGGGTTCCG (4) 1.9 0.0019 P10.5 crx+ retina TGGGTTCCAG (5) 1.9 0.0019 Adult retinal GGCCCAATGA (2) 31.5 0.0315 Adult retinal GAGGATTCCC (2) 25.9 0.0259 Adult retinal GTATTGGCCT (3) 9.3 0.0093 Adult retinal ACACACAAGA (6) 7.4 0.0074 Adult retinal GTGGGTTCCG (4) 7.4 0.0074 Adult retinal GCTTCCTGGC (3) 3.7 0.0037 Adult retinal GGAAAGAACA (4) 3.7 0.0037 Adult retinal AGTGGTGATG (2) 1.9 0.0019 Adult retinal GAGCCCAGGC (3) 1.9 0.0019 Adult retinal GGGGCCCCTT (6) 1.9 0.0019 Adult retinal TGGGTTCCAG (5) 1.9 0.0019 ONL GGCCCAATGA (2) 30.6 0.0306 ONL ACACACAAGA (6) 9.6 0.0096 ONL GAGGATTCCC (2) 3.8 0.0038 ONL GTCCTGGGGA (5) 3.8 0.0038 ONL GAGCCCAGGC (3) 1.9 0.0019 ONL GGGACACAGG 1.9 0.0019 ONL GTATTGGCCT (3) 1.9 0.0019