Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46484	Urod	uroporphyrinogen decarboxylase	4	4 50.6 cM	22275
Gene Ontology	carboxy-lyase activity | heme biosynthesis | lyase activity | porphyrin biosynthesis | uroporphyrinogen decarboxylase activity
Human Homolog	UROD[uroporphyrinogen decarboxylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTCTGCT (4) 8.2 0.0082 P8 Cb GC GTACCTGCCA (5) 4.9 0.0049 P8 Cb GC CTCCCACCTT (15) 3.3 0.0033 P8 Cb GC CAGTCTTGAG (3) 1.6 0.0016 P8 Cb GC TTCTTTTGTA 1.6 0.0016 Cb medulloblastoma CTCCCACCTT (15) 13.9 0.0139 Cb medulloblastoma CCTTTCTGCT (4) 2.3 0.0023 Cb medulloblastoma GGTTGTAAGG (2) 2.3 0.0023 Cb medulloblastoma GTACCTGCCA (5) 2.3 0.0023 P8 GC+1d culture CTCCCACCTT (15) 9.1 0.0091 P8 GC+1d culture CCTTTCTGCT (4) 4.6 0.0046 P8 GC+1d culture CAGTCTTGAG (3) 2.3 0.0023 P8 GC+1d culture GTACCTGCCA (5) 1.1 0.0011 P8 GC+1d culture TTCTTTTGTA 1.1 0.0011 P8 GC+SHH+1d culture CTCCCACCTT (15) 8.2 0.0082 P8 GC+SHH+1d culture CCTTTCTGCT (4) 5.9 0.0059 P8 GC+SHH+1d culture GTACCTGCCA (5) 5.9 0.0059 P8 GC+SHH+1d culture CAGTCTTGAG (3) 4.7 0.0047 P8 GC+SHH+1d culture GGTTGTAAGG (2) 2.3 0.0023 P8 GC+SHH+1d culture GAGAGGTCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCTTTACCC (3) 1.2 0.0012 3T3 fibroblasts CAGTCTTGAG (3) 14 0.014 3T3 fibroblasts CTCCCACCTT (15) 10.5 0.0105 E15 cortex GTACCTGCCA (5) 14.8 0.0148 E15 cortex CTCCCACCTT (15) 9.9 0.0099 P1 cortex CAGTCTTGAG (3) 18.2 0.0182 P1 cortex GTACCTGCCA (5) 4.5 0.0045 Hypothalamus CTCCCACCTT (15) 9.1 0.0091 Hypothalamus CAGTCTTGAG (3) 1.8 0.0018 Hypothalamus CCTTTCTGCT (4) 1.8 0.0018 E12.5 retina CTCCCACCTT (15) 9.4 0.0094 E12.5 retina CCTTTCTGCT (4) 3.8 0.0038 E12.5 retina CAGTCTTGAG (3) 1.9 0.0019 E14.5 retina CTCCCACCTT (15) 12.8 0.0128 E14.5 retina CCTTTCTGCT (4) 5.5 0.0055 E14.5 retina GTACCTGCCA (5) 1.8 0.0018 E16.5 retina CTCCCACCTT (15) 9.1 0.0091 E16.5 retina CCTTTCTGCT (4) 7.2 0.0072 E16.5 retina GTACCTGCCA (5) 3.6 0.0036 E18.5 retina CTCCCACCTT (15) 14.6 0.0146 E18.5 retina GTACCTGCCA (5) 3.6 0.0036 E18.5 retina CAGTCTTGAG (3) 1.8 0.0018 E18.5 retina CCTTTCTGCT (4) 1.8 0.0018 E18.5 retina GGCTTTACCC (3) 1.8 0.0018 P0.5 retina CTCCCACCTT (15) 11.8 0.0118 P0.5 retina CCTTTCTGCT (4) 7.9 0.0079 P0.5 retina CAGTCTTGAG (3) 5.9 0.0059 P0.5 retina GTACCTGCCA (5) 3.9 0.0039 P0.5 retina TTCTTTTGTA 3.9 0.0039 P0.5 retina GGTTGTAAGG (2) 2 0.002 P2.5 retina CTCCCACCTT (15) 15.8 0.0158 P2.5 retina GTACCTGCCA (5) 7 0.007 P2.5 retina CCTTTCTGCT (4) 3.5 0.0035 P4.5 retina CTCCCACCTT (15) 37.6 0.0376 P4.5 retina GTACCTGCCA (5) 7.9 0.0079 P4.5 retina CCTTTCTGCT (4) 4 0.004 P6.5 retina CTCCCACCTT (15) 20 0.02 P6.5 retina GTACCTGCCA (5) 8.3 0.0083 P6.5 retina CAGTCTTGAG (3) 6.7 0.0067 P6.5 retina CCTTTCTGCT (4) 3.3 0.0033 P10.5 crx- retina CTCCCACCTT (15) 13 0.013 P10.5 crx- retina CCTTTCTGCT (4) 5.6 0.0056 P10.5 crx- retina CAGTCTTGAG (3) 1.9 0.0019 P10.5 crx+ retina CTCCCACCTT (15) 21.1 0.0211 P10.5 crx+ retina CCTTTCTGCT (4) 9.6 0.0096 P10.5 crx+ retina GTACCTGCCA (5) 5.8 0.0058 P10.5 crx+ retina CAGTCTTGAG (3) 1.9 0.0019 P10.5 crx+ retina GAGAGGTCAG (2) 1.9 0.0019 Adult retinal CTCCCACCTT (15) 35.2 0.0352 Adult retinal CAGTCTTGAG (3) 5.6 0.0056 Adult retinal CCTTTCTGCT (4) 1.9 0.0019 Adult retinal GTACCTGCCA (5) 1.9 0.0019 ONL CTCCCACCTT (15) 15.3 0.0153 ONL CCTTTCTGCT (4) 3.8 0.0038 ONL GAGAGGTCAG (2) 1.9 0.0019 ONL GGCTTTACCC (3) 1.9 0.0019 ONL TTCTTTTGTA 1.9 0.0019