Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4654	Ptpn5	protein tyrosine phosphatase, non-receptor type 5	7	7 53.0 cM	19259
Gene Ontology	hydrolase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | receptor activity
Human Homolog	PTPN5[protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGAGGAAG (7) 4.9 0.0049 P8 Cb GC ATACATTTAG (5) 3.3 0.0033 Cb medulloblastoma TGTTATCTTG (4) 2.3 0.0023 P8 GC+SHH+1d culture TGCTGTAGTG (2) 1.2 0.0012 3T3 fibroblasts GGAACACACA (4) 3.5 0.0035 E15 cortex ATACATTTAG (5) 4.9 0.0049 P1 cortex TGTTATCTTG (4) 13.6 0.0136 P1 cortex ATACATTTAG (5) 4.5 0.0045 Hypothalamus TGTTATCTTG (4) 7.2 0.0072 Hypothalamus ATACATTTAG (5) 1.8 0.0018 E12.5 retina TGCTGTAGTG (2) 3.8 0.0038 E12.5 retina ATACATTTAG (5) 1.9 0.0019 E12.5 retina GGAACACACA (4) 1.9 0.0019 E14.5 retina TGTTATCTTG (4) 3.6 0.0036 E14.5 retina TGCTGTAGTG (2) 1.8 0.0018 E16.5 retina TGTTATCTTG (4) 3.6 0.0036 E16.5 retina ATACATTTAG (5) 1.8 0.0018 E18.5 retina TGTTATCTTG (4) 1.8 0.0018 P0.5 retina TGTTATCTTG (4) 5.9 0.0059 P0.5 retina TGCTGTAGTG (2) 2 0.002 P2.5 retina TGCTGTAGTG (2) 1.8 0.0018 P2.5 retina TGTTATCTTG (4) 1.8 0.0018 P4.5 retina TGCTGTAGTG (2) 5.9 0.0059 P4.5 retina GGAACACACA (4) 2 0.002 P4.5 retina TGTTATCTTG (4) 2 0.002 P6.5 retina GGAACACACA (4) 1.7 0.0017 P6.5 retina TGCTGTAGTG (2) 1.7 0.0017 P10.5 crx- retina TGTTATCTTG (4) 3.7 0.0037 P10.5 crx- retina ATACATTTAG (5) 1.9 0.0019 P10.5 crx- retina GGAACACACA (4) 1.9 0.0019 P10.5 crx+ retina TGTTATCTTG (4) 1.9 0.0019 Adult retinal ATACATTTAG (5) 1.9 0.0019 Adult retinal GTGGAGGAAG (7) 1.9 0.0019 ONL TGCTGTAGTG (2) 1.9 0.0019