Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4657	Apba2	amyloid beta (A4) precursor protein-binding, family A, member 2	7	7 25.5 cM	11784
Gene Ontology	protein binding | protein transport
Human Homolog	APBA2[amyloid beta (A4) precursor protein-binding, family A, member 2 (X11-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGCAGCAG (6) 11.4 0.0114 P8 Cb GC GTCACGAAAA 11.4 0.0114 P8 Cb GC CAGCTGACCC (2) 8.2 0.0082 P8 Cb GC TTTAGGCTCC 6.5 0.0065 P8 Cb GC GTCACGATGT (2) 4.9 0.0049 Cb medulloblastoma CAGCTGACCC (2) 16.2 0.0162 Cb medulloblastoma CCTGCAGCAG (6) 6.9 0.0069 Cb medulloblastoma GTCACGATGT (2) 2.3 0.0023 P8 GC+1d culture TTTAGGCTCC 12.6 0.0126 P8 GC+1d culture CCTGCAGCAG (6) 9.1 0.0091 P8 GC+1d culture GTCACGAAAA 9.1 0.0091 P8 GC+1d culture CAGCTGACCC (2) 8 0.008 P8 GC+1d culture ACCAGCAGCC (5) 1.1 0.0011 P8 GC+1d culture GTCACGATGT (2) 1.1 0.0011 P8 GC+SHH+1d culture GTCACGAAAA 16.4 0.0164 P8 GC+SHH+1d culture CAGCTGACCC (2) 10.5 0.0105 P8 GC+SHH+1d culture CCTGCAGCAG (6) 9.4 0.0094 P8 GC+SHH+1d culture TTTAGGCTCC 5.9 0.0059 P8 GC+SHH+1d culture GTCACGATGT (2) 1.2 0.0012 3T3 fibroblasts ACCAGCAGCC (5) 3.5 0.0035 3T3 fibroblasts CCTGCAGCAG (6) 3.5 0.0035 E15 cortex GTCACGAAAA 14.8 0.0148 E15 cortex CAGCTGACCC (2) 9.9 0.0099 E15 cortex CCTGCAGCAG (6) 4.9 0.0049 E15 cortex TTTAGGCTCC 4.9 0.0049 P1 cortex ACCAGCAGCC (5) 4.5 0.0045 P1 cortex GTCACGAAAA 4.5 0.0045 P1 cortex GTCACGATGT (2) 4.5 0.0045 P1 cortex TTTAGGCTCC 4.5 0.0045 Hypothalamus CCTGCAGCAG (6) 9.1 0.0091 Hypothalamus TTTAGGCTCC 3.6 0.0036 Hypothalamus CAGCTGACCC (2) 1.8 0.0018 Hypothalamus GTCACGAAAA 1.8 0.0018 E12.5 retina GTCACGAAAA 7.5 0.0075 E12.5 retina CAGCTGACCC (2) 1.9 0.0019 E12.5 retina GTCACGATGT (2) 1.9 0.0019 E12.5 retina TTTAGGCTCC 1.9 0.0019 E14.5 retina CCTGCAGCAG (6) 5.5 0.0055 E14.5 retina GTCACGAAAA 1.8 0.0018 E14.5 retina TTTAGGCTCC 1.8 0.0018 E16.5 retina CCTGCAGCAG (6) 9.1 0.0091 E16.5 retina GTCACGAAAA 7.2 0.0072 E16.5 retina TTTAGGCTCC 5.4 0.0054 E16.5 retina CAGCTGACCC (2) 1.8 0.0018 E18.5 retina GTCACGAAAA 12.7 0.0127 E18.5 retina CCTGCAGCAG (6) 9.1 0.0091 E18.5 retina CAGCTGACCC (2) 3.6 0.0036 E18.5 retina TTTAGGCTCC 1.8 0.0018 P0.5 retina CAGCTGACCC (2) 7.9 0.0079 P0.5 retina TTTAGGCTCC 7.9 0.0079 P0.5 retina CCTGCAGCAG (6) 5.9 0.0059 P0.5 retina ACCAGCAGCC (5) 2 0.002 P0.5 retina GTCACGAAAA 2 0.002 P0.5 retina GTCACGATGT (2) 2 0.002 P2.5 retina GTCACGAAAA 14.1 0.0141 P2.5 retina CAGCTGACCC (2) 10.6 0.0106 P2.5 retina CCTGCAGCAG (6) 10.6 0.0106 P2.5 retina GTCACGATGT (2) 5.3 0.0053 P2.5 retina TTTAGGCTCC 3.5 0.0035 P4.5 retina CAGCTGACCC (2) 4 0.004 P4.5 retina GTCACGAAAA 4 0.004 P4.5 retina TTTAGGCTCC 4 0.004 P4.5 retina GTCACGATGT (2) 2 0.002 P6.5 retina CAGCTGACCC (2) 3.3 0.0033 P6.5 retina GTCACGAAAA 1.7 0.0017 P6.5 retina GTCACGATGT (2) 1.7 0.0017 P10.5 crx- retina CCTGCAGCAG (6) 18.6 0.0186 P10.5 crx- retina TTTAGGCTCC 7.4 0.0074 P10.5 crx- retina CAGCTGACCC (2) 1.9 0.0019 P10.5 crx- retina GTCACGAAAA 1.9 0.0019 P10.5 crx+ retina CCTGCAGCAG (6) 19.2 0.0192 P10.5 crx+ retina CAGCTGACCC (2) 7.7 0.0077 P10.5 crx+ retina GTCACGAAAA 1.9 0.0019 P10.5 crx+ retina GTCACGATGT (2) 1.9 0.0019 Adult retinal CCTGCAGCAG (6) 7.4 0.0074 Adult retinal CAGCTGACCC (2) 1.9 0.0019 Adult retinal TTTAGGCTCC 1.9 0.0019 ONL CAGCTGACCC (2) 1.9 0.0019 ONL CCTGCAGCAG (6) 1.9 0.0019 ONL GTCACGATGT (2) 1.9 0.0019