Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46654	5730437N04Rik	RIKEN cDNA 5730437N04 gene	17		70544
Human Homolog	LOC121498[similar to lactate dehydrogenase A-like 6; lactate dehydrogenase A -like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTAAGATCT (2) 3.3 0.0033 P8 Cb GC AGAATGCCAA (5) 1.6 0.0016 Cb medulloblastoma AGAATGCCAA (5) 2.3 0.0023 Cb medulloblastoma GCTAAGATCT (2) 2.3 0.0023 Cb medulloblastoma TGTGTGTGCG (2) 2.3 0.0023 P8 GC+1d culture GCTAAGATCT (2) 8 0.008 P8 GC+1d culture TTCCCTGAAG (4) 1.1 0.0011 P8 GC+SHH+1d culture GCTAAGATCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCCCTGAAG (4) 1.2 0.0012 3T3 fibroblasts GCTAAGATCT (2) 14 0.014 3T3 fibroblasts TTCCCTGAAG (4) 7 0.007 Hypothalamus TGTGTGTGCG (2) 1.8 0.0018 E12.5 retina GCTAAGATCT (2) 5.6 0.0056 E14.5 retina GCTAAGATCT (2) 3.6 0.0036 E14.5 retina TTCCCTGAAG (4) 1.8 0.0018 E16.5 retina GCTAAGATCT (2) 5.4 0.0054 E16.5 retina GGGAATCTCT (4) 1.8 0.0018 E18.5 retina GCTAAGATCT (2) 5.5 0.0055 P0.5 retina TGTGTGTGCG (2) 3.9 0.0039 P0.5 retina AGAATGCCAA (5) 2 0.002 P0.5 retina GCTAAGATCT (2) 2 0.002 P0.5 retina TTCCCTGAAG (4) 2 0.002 P2.5 retina GCTAAGATCT (2) 5.3 0.0053 P2.5 retina TTCCCTGAAG (4) 3.5 0.0035 P4.5 retina GCTAAGATCT (2) 2 0.002 P6.5 retina TTCCCTGAAG (4) 3.3 0.0033 P6.5 retina GCTAAGATCT (2) 1.7 0.0017 P6.5 retina GGGAATCTCT (4) 1.7 0.0017 P10.5 crx- retina GCTAAGATCT (2) 3.7 0.0037 P10.5 crx- retina TTCCCTGAAG (4) 3.7 0.0037 P10.5 crx+ retina GCTAAGATCT (2) 3.8 0.0038 P10.5 crx+ retina TTCCCTGAAG (4) 3.8 0.0038 Adult retinal TTCCCTGAAG (4) 48.1 0.0481 Adult retinal GCTAAGATCT (2) 1.9 0.0019 ONL TTCCCTGAAG (4) 32.6 0.0326 ONL GCTAAGATCT (2) 1.9 0.0019 ONL TGTGTGTGCG (2) 1.9 0.0019