Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46754	Slc38a2	solute carrier family 38, member 2	15		67760
Human Homolog	SLC38A2[solute carrier family 38, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTAATCAAA (3) 19.6 0.0196 P8 Cb GC GGTTTTGTTT (4) 13.1 0.0131 P8 Cb GC ATTAATCAAT 6.5 0.0065 P8 Cb GC GCAACAAGGC (3) 1.6 0.0016 P8 Cb GC GCTAATACTG (4) 1.6 0.0016 P8 Cb GC GGCTTGATTG (5) 1.6 0.0016 P8 Cb GC GGGACAACCA (7) 1.6 0.0016 P8 Cb GC GTTTTGTTTT (8) 1.6 0.0016 P8 Cb GC TGGTAGCTAC 1.6 0.0016 P8 Cb GC TTTGGCTGTT (6) 1.6 0.0016 P8 Cb GC TTTTGAGTTT (4) 1.6 0.0016 Cb medulloblastoma ATTAATCAAA (3) 16.2 0.0162 Cb medulloblastoma GGTTTTGTTT (4) 4.6 0.0046 Cb medulloblastoma GCTGACACAG (3) 2.3 0.0023 Cb medulloblastoma TGGTAGCTAC 2.3 0.0023 Cb medulloblastoma TTCTGAGTCT (2) 2.3 0.0023 P8 GC+1d culture GGGACAACCA (7) 4.6 0.0046 P8 GC+1d culture ATTAATCAAA (3) 2.3 0.0023 P8 GC+1d culture TAACAATAAT (2) 2.3 0.0023 P8 GC+1d culture TTCTGAGTCT (2) 2.3 0.0023 P8 GC+1d culture GGTTTTGTTT (4) 1.1 0.0011 P8 GC+1d culture TTGGCTGTCC (3) 1.1 0.0011 P8 GC+SHH+1d culture ATTAATCAAA (3) 9.4 0.0094 P8 GC+SHH+1d culture ATTAATCAAT 7 0.007 P8 GC+SHH+1d culture GGTTTTGTTT (4) 3.5 0.0035 P8 GC+SHH+1d culture CCTCTGTGGC (4) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTGTTTT (8) 2.3 0.0023 P8 GC+SHH+1d culture TAACAATAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTGGCTGTCC (3) 2.3 0.0023 P8 GC+SHH+1d culture GAACGTTTCA 1.2 0.0012 P8 GC+SHH+1d culture GGCTTGATTG (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGACAACCA (7) 1.2 0.0012 P8 GC+SHH+1d culture GTTTTTGTTA (6) 1.2 0.0012 P8 GC+SHH+1d culture TTCTGAGTCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTGAGTTT (4) 1.2 0.0012 E15 cortex GGTTTTGTTT (4) 9.9 0.0099 P1 cortex GGTTTTGTTT (4) 18.2 0.0182 P1 cortex ATTAATCAAA (3) 4.5 0.0045 P1 cortex GCTAATACTG (4) 4.5 0.0045 P1 cortex TTCTGAGTCT (2) 4.5 0.0045 Hypothalamus ATTAATCAAA (3) 3.6 0.0036 Hypothalamus GAACGTTTCA 1.8 0.0018 Hypothalamus GTTTTTGTTA (6) 1.8 0.0018 Hypothalamus TTCTGAGTCT (2) 1.8 0.0018 Hypothalamus TTTGGCTGTT (6) 1.8 0.0018 Hypothalamus TTTTGAGTTT (4) 1.8 0.0018 E12.5 retina ATTAATCAAA (3) 18.8 0.0188 E12.5 retina ATTAATCAAT 7.5 0.0075 E12.5 retina GGCTTGATTG (5) 3.8 0.0038 E12.5 retina GGTTTTGTTT (4) 3.8 0.0038 E12.5 retina GTTTTGTTTT (8) 3.8 0.0038 E12.5 retina TTGGCTGTCC (3) 1.9 0.0019 E14.5 retina ATTAATCAAA (3) 20 0.02 E14.5 retina GGTTTTGTTT (4) 7.3 0.0073 E14.5 retina ATTAATCAAT 1.8 0.0018 E14.5 retina GCTAATACTG (4) 1.8 0.0018 E16.5 retina GGTTTTGTTT (4) 9.1 0.0091 E16.5 retina ATTAATCAAA (3) 3.6 0.0036 E16.5 retina ATTAATCAAT 3.6 0.0036 E16.5 retina GAACGTTTCA 3.6 0.0036 E16.5 retina TTGGCTGTCC (3) 3.6 0.0036 E16.5 retina GCTGACACAG (3) 1.8 0.0018 E18.5 retina ATTAATCAAA (3) 23.6 0.0236 E18.5 retina ATTAATCAAT 14.6 0.0146 E18.5 retina GGTTTTGTTT (4) 3.6 0.0036 E18.5 retina GCTGACACAG (3) 1.8 0.0018 E18.5 retina TGGTAGCTAC 1.8 0.0018 P0.5 retina GGTTTTGTTT (4) 11.8 0.0118 P0.5 retina ATTAATCAAA (3) 7.9 0.0079 P0.5 retina ATTAATCAAT 2 0.002 P2.5 retina GGTTTTGTTT (4) 10.6 0.0106 P2.5 retina ATTAATCAAA (3) 7 0.007 P2.5 retina ATTAATCAAT 3.5 0.0035 P2.5 retina GTTTTTGTTA (6) 3.5 0.0035 P2.5 retina GGGACAACCA (7) 1.8 0.0018 P2.5 retina TTGGCTGTCC (3) 1.8 0.0018 P2.5 retina TTTGGCTGTT (6) 1.8 0.0018 P4.5 retina ATTAATCAAA (3) 9.9 0.0099 P4.5 retina GGCTTGATTG (5) 4 0.004 P4.5 retina ATTAATCAAT 2 0.002 P4.5 retina GGTTTTGTTT (4) 2 0.002 P4.5 retina TTCTGAGTCT (2) 2 0.002 P4.5 retina TTTTGAGTTT (4) 2 0.002 P6.5 retina ATTAATCAAA (3) 8.3 0.0083 P6.5 retina GGTTTTGTTT (4) 8.3 0.0083 P6.5 retina GTTTTGTTTT (8) 3.3 0.0033 P6.5 retina GAACGTTTCA 1.7 0.0017 P6.5 retina GCAACAAGGC (3) 1.7 0.0017 P6.5 retina GTTTTTGTTA (6) 1.7 0.0017 P6.5 retina TTCTGAGTCT (2) 1.7 0.0017 P10.5 crx- retina GGTTTTGTTT (4) 14.9 0.0149 P10.5 crx- retina ATTAATCAGT 5.6 0.0056 P10.5 crx- retina ATTAATCAAA (3) 1.9 0.0019 P10.5 crx+ retina ATTAATCAGT 9.6 0.0096 P10.5 crx+ retina GGTTTTGTTT (4) 5.8 0.0058 P10.5 crx+ retina CCTCTGTGGC (4) 1.9 0.0019 P10.5 crx+ retina GCTAATACTG (4) 1.9 0.0019 P10.5 crx+ retina GGGACAACCA (7) 1.9 0.0019 Adult retinal TTCTGAGTCT (2) 3.7 0.0037 Adult retinal ATTAATCAAA (3) 1.9 0.0019 Adult retinal ATTAATCAAT 1.9 0.0019 Adult retinal GCTGACACAG (3) 1.9 0.0019 Adult retinal GGGACAACCA (7) 1.9 0.0019 Adult retinal GTTTTGTTTT (8) 1.9 0.0019 ONL GTTTTGTTTT (8) 5.7 0.0057 ONL ATTAATCAAA (3) 1.9 0.0019 ONL GGTTTTGTTT (4) 1.9 0.0019