Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4848	Fyn	Fyn proto-oncogene	10	10 25.0 cM	14360
Gene Ontology	ATP binding | cell growth and/or maintenance | intracellular | intracellular signaling cascade | kinase activity | myelination | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | regulation of cell cycle | regulation of cell shape | transferase activity | tubulin binding
Human Homolog	FYN[FYN oncogene related to SRC, FGR, YES]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTAACAAA (9) 8.2 0.0082 P8 Cb GC GGGGTGCACA (3) 3.3 0.0033 P8 Cb GC TGATTTTGAA (3) 1.6 0.0016 Cb medulloblastoma GGGGTGCACA (3) 9.2 0.0092 Cb medulloblastoma TTTTAACAAA (9) 9.2 0.0092 Cb medulloblastoma ATAACAGACG (2) 2.3 0.0023 Cb medulloblastoma TGATTTTGAA (3) 2.3 0.0023 P8 GC+1d culture TGATTTTGAA (3) 6.8 0.0068 P8 GC+1d culture GGGGTGCACA (3) 5.7 0.0057 P8 GC+1d culture TTTTAACAAA (9) 4.6 0.0046 P8 GC+1d culture TGACTCTGAA 2.3 0.0023 P8 GC+1d culture ATAACAGACG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGATTTTGAA (3) 8.2 0.0082 P8 GC+SHH+1d culture TTTTAACAAA (9) 8.2 0.0082 P8 GC+SHH+1d culture GGGGTGCACA (3) 4.7 0.0047 P8 GC+SHH+1d culture TGACTCTGAA 1.2 0.0012 3T3 fibroblasts TGACTCTGAA 3.5 0.0035 E15 cortex GGGGTGCACA (3) 9.9 0.0099 E15 cortex AAATGTAAAG (4) 4.9 0.0049 P1 cortex TTTTAACAAA (9) 13.6 0.0136 P1 cortex TGACTCTGAA 9.1 0.0091 P1 cortex GGGGTGCACA (3) 4.5 0.0045 Hypothalamus TGATTTTGAA (3) 3.6 0.0036 Hypothalamus GGGGTGCACA (3) 1.8 0.0018 Hypothalamus TGACTCTGAA 1.8 0.0018 Hypothalamus TTTTAACAAA (9) 1.8 0.0018 E12.5 retina TTTTAACAAA (9) 7.5 0.0075 E12.5 retina AAATGTAAAG (4) 5.6 0.0056 E12.5 retina TGACTCTGAA 1.9 0.0019 E14.5 retina TGATTTTGAA (3) 9.1 0.0091 E14.5 retina TTTTAACAAA (9) 5.5 0.0055 E14.5 retina GGGGTGCACA (3) 1.8 0.0018 E16.5 retina TTTTAACAAA (9) 10.9 0.0109 E16.5 retina GGGGTGCACA (3) 1.8 0.0018 E16.5 retina TGATTTTGAA (3) 1.8 0.0018 E18.5 retina TGATTTTGAA (3) 7.3 0.0073 E18.5 retina TTTTAACAAA (9) 5.5 0.0055 E18.5 retina AAATGTAAAG (4) 1.8 0.0018 P0.5 retina TTTTAACAAA (9) 3.9 0.0039 P2.5 retina TGACTCTGAA 1.8 0.0018 P2.5 retina TGATTTTGAA (3) 1.8 0.0018 P2.5 retina TTTTAACAAA (9) 1.8 0.0018 P4.5 retina TGACTCTGAA 5.9 0.0059 P4.5 retina TGACTTTTTT (5) 2 0.002 P4.5 retina TGATTTTGAA (3) 2 0.002 P4.5 retina TTTTAACAAA (9) 2 0.002 P6.5 retina GGGGTGCACA (3) 3.3 0.0033 P6.5 retina TGATTTTGAA (3) 3.3 0.0033 P6.5 retina AAATGTAAAG (4) 1.7 0.0017 P6.5 retina TGACTCTGAA 1.7 0.0017 P6.5 retina TGACTTTTTT (5) 1.7 0.0017 P6.5 retina TTTTAACAAA (9) 1.7 0.0017 P10.5 crx- retina ATAACAGACG (2) 1.9 0.0019 P10.5 crx- retina GGGGTGCACA (3) 1.9 0.0019 P10.5 crx- retina TGATTTTGAA (3) 1.9 0.0019 P10.5 crx- retina TTTTAACAAA (9) 1.9 0.0019 P10.5 crx+ retina TGATTTTGAA (3) 7.7 0.0077 P10.5 crx+ retina TTTTAACAAA (9) 5.8 0.0058 P10.5 crx+ retina AAATGTAAAG (4) 1.9 0.0019 P10.5 crx+ retina GGGGTGCACA (3) 1.9 0.0019 P10.5 crx+ retina TGACTCTGAA 1.9 0.0019 Adult retinal TGATTTTGAA (3) 5.6 0.0056 Adult retinal AAATGTAAAG (4) 1.9 0.0019 Adult retinal AAATGTAAAT 1.9 0.0019 Adult retinal GGGGTGCACA (3) 1.9 0.0019 Adult retinal TGACTCTGAA 1.9 0.0019 ONL TGATTTTGAA (3) 7.7 0.0077 ONL AAATGTAAAT 5.7 0.0057 ONL TTTTAACAAA (9) 3.8 0.0038 ONL AAATGTAAAG (4) 1.9 0.0019 ONL GGGGTGCACA (3) 1.9 0.0019 ONL TGACTTTTTT (5) 1.9 0.0019