Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.48638	Prkaa2	protein kinase, AMP-activated, alpha 2 catalytic subunit	4		108079
Gene Ontology	ATP binding | kinase activity | nucleus | protein serine/threonine kinase activity | response to stress | SNF1A/AMP-activated protein kinase activity | transferase activity
Human Homolog	PRKAA2[protein kinase, AMP-activated, alpha 2 catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATATTCCTC (3) 1.6 0.0016 Cb medulloblastoma GCTGAGAAGC (9) 2.3 0.0023 Cb medulloblastoma TGTGCTAATA (4) 2.3 0.0023 P8 GC+1d culture GCTGAGAAGC (9) 1.1 0.0011 P8 GC+1d culture TTTTCTAAAT (6) 1.1 0.0011 P8 GC+SHH+1d culture TTTTCTAAAT (6) 5.9 0.0059 P8 GC+SHH+1d culture GGCTTCGAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGCTAATA (4) 1.2 0.0012 E15 cortex GGCGGGATGA (3) 9.9 0.0099 Hypothalamus GGCGGGATGA (3) 1.8 0.0018 Hypothalamus GGCTTCGAAT (2) 1.8 0.0018 Hypothalamus TGTGCTAATA (4) 1.8 0.0018 E12.5 retina CATATTCCTC (3) 1.9 0.0019 E14.5 retina TTTTCTAAAT (6) 1.8 0.0018 E16.5 retina GGCGGGATGA (3) 1.8 0.0018 E16.5 retina TGTGCTAATA (4) 1.8 0.0018 E18.5 retina TTTTCTAAAT (6) 1.8 0.0018 P0.5 retina GGCGGGATGA (3) 3.9 0.0039 P0.5 retina TGTGCTAATA (4) 2 0.002 P2.5 retina TGTGCTAATA (4) 3.5 0.0035 P2.5 retina TTTTCTAAAT (6) 3.5 0.0035 P4.5 retina CATATTCCTC (3) 2 0.002 P6.5 retina CATATTCCTC (3) 1.7 0.0017 P6.5 retina TGTGCTAATA (4) 1.7 0.0017 P6.5 retina TTTTCTAAAT (6) 1.7 0.0017 P10.5 crx- retina GCTGAGAAGC (9) 1.9 0.0019 P10.5 crx- retina GGCTTCGAAT (2) 1.9 0.0019 P10.5 crx+ retina TTTTCTAAAT (6) 3.8 0.0038 P10.5 crx+ retina GGCTTCGAAT (2) 1.9 0.0019 ONL GCTGAGAAGC (9) 1.9 0.0019 ONL GGCTTCGAAT (2) 1.9 0.0019 ONL TTTTCTAAAT (6) 1.9 0.0019