Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4933	Mcm6	minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	1	1 66.6 cM	17219
Gene Ontology	ATP binding | cell cycle | DNA binding | DNA dependent ATPase activity | DNA replication | DNA replication initiation | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MCM6[MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAAACA (10) 17.9 0.0179 P8 Cb GC AAAATAAAAC (2) 9.8 0.0098 P8 Cb GC AACTCCACCC (2) 4.9 0.0049 P8 Cb GC AAAATAAAAT (8) 1.6 0.0016 P8 Cb GC TGTCTGTGGA (5) 1.6 0.0016 P8 Cb GC TTGCATTCCA (2) 1.6 0.0016 Cb medulloblastoma AAATAAAACA (10) 39.3 0.0393 Cb medulloblastoma TTGCATTCCA (2) 9.2 0.0092 Cb medulloblastoma AACTCCACCC (2) 2.3 0.0023 P8 GC+1d culture AAATAAAACA (10) 13.7 0.0137 P8 GC+1d culture AACTCCACCC (2) 9.1 0.0091 P8 GC+1d culture TTGCATTCCA (2) 4.6 0.0046 P8 GC+1d culture AAAATAAAAC (2) 3.4 0.0034 P8 GC+1d culture CTGGCCTTGA (11) 2.3 0.0023 P8 GC+1d culture AAAATAAACA 1.1 0.0011 P8 GC+1d culture CACTGCTGTG (4) 1.1 0.0011 P8 GC+SHH+1d culture AAATAAAACA (10) 29.3 0.0293 P8 GC+SHH+1d culture AAAATAAAAC (2) 11.7 0.0117 P8 GC+SHH+1d culture AACTCCACCC (2) 3.5 0.0035 P8 GC+SHH+1d culture CTGGCCTTGA (11) 2.3 0.0023 P8 GC+SHH+1d culture AAAATAAAAT (8) 1.2 0.0012 P8 GC+SHH+1d culture CACTGCTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTGCATTCCA (2) 1.2 0.0012 3T3 fibroblasts AACTCCACCC (2) 14 0.014 E15 cortex AAATAAAACA (10) 4.9 0.0049 E15 cortex AACTCCACCC (2) 4.9 0.0049 P1 cortex AAATAAAACA (10) 9.1 0.0091 P1 cortex TGTCTGTGGA (5) 4.5 0.0045 Hypothalamus AAATAAAACA (10) 48.9 0.0489 Hypothalamus TTGCATTCCA (2) 7.2 0.0072 Hypothalamus AACTCCACCC (2) 3.6 0.0036 Hypothalamus AAAATAAAAC (2) 1.8 0.0018 Hypothalamus CTGGCCTTGA (11) 1.8 0.0018 E12.5 retina AAAATAAAAC (2) 35.7 0.0357 E12.5 retina AAATAAAACA (10) 24.4 0.0244 E12.5 retina AACTCCACCC (2) 9.4 0.0094 E14.5 retina AAATAAAACA (10) 34.6 0.0346 E14.5 retina AAAATAAAAC (2) 29.2 0.0292 E14.5 retina CTGGCCTTGA (11) 3.6 0.0036 E14.5 retina AACTCCACCC (2) 1.8 0.0018 E16.5 retina AAAATAAAAC (2) 29 0.029 E16.5 retina AAATAAAACA (10) 29 0.029 E16.5 retina AACTCCACCC (2) 3.6 0.0036 E16.5 retina CTGGCCTTGA (11) 1.8 0.0018 E18.5 retina AAATAAAACA (10) 52.8 0.0528 E18.5 retina AAAATAAAAC (2) 41.8 0.0418 E18.5 retina CTGGCCTTGA (11) 3.6 0.0036 E18.5 retina AAAATAAACA 1.8 0.0018 E18.5 retina AACTCCACCC (2) 1.8 0.0018 E18.5 retina GAAGAGTTCC (3) 1.8 0.0018 E18.5 retina TTGCATTCCA (2) 1.8 0.0018 P0.5 retina AACTCCACCC (2) 11.8 0.0118 P0.5 retina AAATAAAACA (10) 7.9 0.0079 P0.5 retina AAAATAAAAC (2) 3.9 0.0039 P0.5 retina GAAGAGTTCC (3) 2 0.002 P0.5 retina TGTCTGTGGA (5) 2 0.002 P2.5 retina AAATAAAACA (10) 15.8 0.0158 P2.5 retina AAAATAAAAC (2) 10.6 0.0106 P2.5 retina AACTCCACCC (2) 7 0.007 P2.5 retina CACTGCTGTG (4) 1.8 0.0018 P2.5 retina CTGGCCTTGA (11) 1.8 0.0018 P2.5 retina TTGCATTCCA (2) 1.8 0.0018 P4.5 retina AAATAAAACA (10) 25.8 0.0258 P4.5 retina AAAATAAAAC (2) 7.9 0.0079 P4.5 retina TTGCATTCCA (2) 4 0.004 P4.5 retina GAAGAGTTCC (3) 2 0.002 P6.5 retina AAATAAAACA (10) 41.7 0.0417 P6.5 retina AACTCCACCC (2) 10 0.01 P6.5 retina AAAATAAAAC (2) 5 0.005 P6.5 retina TTGCATTCCA (2) 3.3 0.0033 P6.5 retina CTGGCCTTGA (11) 1.7 0.0017 P6.5 retina GAAGAGTTCC (3) 1.7 0.0017 P10.5 crx- retina AAATAAAACA (10) 26 0.026 P10.5 crx- retina AACTCCACCC (2) 24.2 0.0242 P10.5 crx- retina GAAGAGTTCC (3) 3.7 0.0037 P10.5 crx- retina CACTGCTGTG (4) 1.9 0.0019 P10.5 crx+ retina AAATAAAACA (10) 21.1 0.0211 P10.5 crx+ retina AACTCCACCC (2) 5.8 0.0058 P10.5 crx+ retina CACTGCTGTG (4) 1.9 0.0019 P10.5 crx+ retina TTGCATTCCA (2) 1.9 0.0019 Adult retinal AAATAAAACA (10) 3.7 0.0037 Adult retinal AAAATAAAAC (2) 1.9 0.0019 Adult retinal AACTCCACCC (2) 1.9 0.0019 Adult retinal CACTGCTGTG (4) 1.9 0.0019 Adult retinal GAAGAGTTCC (3) 1.9 0.0019 Adult retinal TGTCTGTGGA (5) 1.9 0.0019 Adult retinal TTGCATTCCA (2) 1.9 0.0019 ONL AAATAAAACA (10) 32.6 0.0326 ONL AAAATAAAAT (8) 3.8 0.0038 ONL CTGGCCTTGA (11) 3.8 0.0038 ONL TTGCATTCCA (2) 1.9 0.0019