Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.49611
A530065I17Rik
RIKEN cDNA A530065I17 gene
9
319742
Human Homolog
LOC196264[hypothetical protein LOC196264]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
CTGTGGGCCT (
3
)
1.6
0.0016
P8 Cb GC
GAAGCTTTAC
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
CTGTGGGCCT (
3
)
2.3
0.0023
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
CTGTCTTCTG (
11
)
3.4
0.0034
P8 GC+1d culture
GTCCCCGGGA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
CTGTCTTCTG (
11
)
3.5
0.0035
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
GTCCCCGGGA (
6
)
3.5
0.0035
E15 cortex
CACACACACA (
106
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
CAGTATTTAA (
4
)
3.6
0.0036
Hypothalamus
CTGTCTTCTG (
11
)
1.8
0.0018
Hypothalamus
GAAGCTTTAC
1.8
0.0018
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
CTGTCTTCTG (
11
)
1.9
0.0019
E12.5 retina
GAAGCTTTAC
1.9
0.0019
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
TGAGCCTGTC
(
11
)
3.6
0.0036
E16.5 retina
CTGTCTTCTG (
11
)
1.8
0.0018
E16.5 retina
CTGTGGGCCT (
3
)
1.8
0.0018
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
CTGTCTTCTG (
11
)
1.8
0.0018
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
CTGTCTTCTG (
11
)
2
0.002
P0.5 retina
GTCCCCGGGA (
6
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
CAGTATTTAA (
4
)
2
0.002
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
CTGTCTTCTG (
11
)
3.7
0.0037
P10.5 crx- retina
GTCCCCGGGA (
6
)
1.9
0.0019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
TGAGCCTGTC
(
11
)
3.8
0.0038
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
CTGTCTTCTG (
11
)
1.9
0.0019
Adult retinal
CTGTGGGCCT (
3
)
1.9
0.0019
ONL
CACACACACA (
106
)
21.1
0.0211
