Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.49826
Papd1
PAP associated domain containing 1
18
67440
Mm.49826
4833419F23Rik
RIKEN cDNA 4833419F23 gene
18
73915
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 23 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCACAGTG (
3
)
16.3
0.0163
Cb medulloblastoma
CTGCACAGTG (
3
)
11.6
0.0116
P8 GC+1d culture
CTGCACAGTG (
3
)
18.3
0.0183
P8 GC+1d culture
CTTTTACTCG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGCACAGTG (
3
)
11.7
0.0117
3T3 fibroblasts
CTGCACAGTG (
3
)
21
0.021
3T3 fibroblasts
CCCAGTTTTG (
2
)
3.5
0.0035
E15 cortex
CTGCACAGTG (
3
)
29.7
0.0297
P1 cortex
CTGCACAGTG (
3
)
9.1
0.0091
P1 cortex
GAATTTTTAT
(
5
)
4.5
0.0045
Hypothalamus
CCCAGTTTTG (
2
)
1.8
0.0018
Hypothalamus
CTGCACAGTG (
3
)
1.8
0.0018
E12.5 retina
CTGCACAGTG (
3
)
5.6
0.0056
E12.5 retina
GAATTTTTAT
(
5
)
3.8
0.0038
E16.5 retina
CTGCACAGTG (
3
)
1.8
0.0018
E18.5 retina
CTGCACAGTG (
3
)
3.6
0.0036
P0.5 retina
CTGCACAGTG (
3
)
11.8
0.0118
P2.5 retina
CTGCACAGTG (
3
)
3.5
0.0035
P6.5 retina
CTGCACAGTG (
3
)
3.3
0.0033
P10.5 crx- retina
CTTTTACTCG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTTTTACTCG
(
2
)
1.9
0.0019
Adult retinal
CTGCACAGTG (
3
)
7.4
0.0074
ONL
CCCAGTTTTG (
2
)
1.9
0.0019
