Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5021	Ddr1	discoidin domain receptor family, member 1	17	17 C (17 21.5 cM)	12305
Gene Ontology	ATP binding | cell adhesion | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	DDR1[discoidin domain receptor family, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

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SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAGCACAA (3) 48.9 0.0489 P8 Cb GC GCTGCTGGTG (9) 13.1 0.0131 P8 Cb GC CTGCAGCTAG (3) 3.3 0.0033 P8 Cb GC CAGTTATTTT (6) 1.6 0.0016 P8 Cb GC GATTCAATTA 1.6 0.0016 Cb medulloblastoma GCTGCTGGTG (9) 23.1 0.0231 Cb medulloblastoma GGCAGCACAA (3) 20.8 0.0208 Cb medulloblastoma CAGTTATTTT (6) 2.3 0.0023 Cb medulloblastoma GATTCAATTA 2.3 0.0023 P8 GC+1d culture GCTGCTGGTG (9) 16 0.016 P8 GC+1d culture GGCAGCACAA (3) 13.7 0.0137 P8 GC+1d culture CTGCAGCTAG (3) 11.4 0.0114 P8 GC+1d culture CTACAGCTAG 3.4 0.0034 P8 GC+1d culture AATGGCTGCT 1.1 0.0011 P8 GC+1d culture CAGTTATTTT (6) 1.1 0.0011 P8 GC+SHH+1d culture GGCAGCACAA (3) 24.6 0.0246 P8 GC+SHH+1d culture CTGCAGCTAG (3) 11.7 0.0117 P8 GC+SHH+1d culture GCTGCTGGTG (9) 8.2 0.0082 P8 GC+SHH+1d culture GGGGTAAGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture CAGTTATTTT (6) 2.3 0.0023 P8 GC+SHH+1d culture CTACAGCTAG 2.3 0.0023 3T3 fibroblasts GGCAGCACAA (3) 38.6 0.0386 3T3 fibroblasts GCTGCTGGTG (9) 3.5 0.0035 E15 cortex GGCAGCACAA (3) 29.7 0.0297 E15 cortex GCTGCTGGTG (9) 14.8 0.0148 E15 cortex ATGGAAATGG (3) 9.9 0.0099 E15 cortex CTGCAGCTAG (3) 9.9 0.0099 P1 cortex GGCAGCACAA (3) 100 0.1 P1 cortex GCTGCTGGTG (9) 13.6 0.0136 Hypothalamus GCTGCTGGTG (9) 18.1 0.0181 Hypothalamus GGCAGCACAA (3) 10.9 0.0109 E12.5 retina GGCAGCACAA (3) 22.5 0.0225 E12.5 retina CTGCAGCTAG (3) 11.3 0.0113 E12.5 retina GCTGCTGGTG (9) 5.6 0.0056 E14.5 retina GCTGCTGGTG (9) 14.6 0.0146 E14.5 retina GGCAGCACAA (3) 12.8 0.0128 E14.5 retina CTGCAGCTAG (3) 5.5 0.0055 E14.5 retina GAGGGAGAGA (5) 3.6 0.0036 E14.5 retina AATGGCTGCT 1.8 0.0018 E16.5 retina GCTGCTGGTG (9) 12.7 0.0127 E16.5 retina GGCAGCACAA (3) 12.7 0.0127 E16.5 retina AATGGCTGCT 5.4 0.0054 E16.5 retina CTGCAGCTAG (3) 1.8 0.0018 E16.5 retina GAGGGAGAGA (5) 1.8 0.0018 E16.5 retina GCAGGTGAGA 1.8 0.0018 E16.5 retina GGGGTAAGAA (2) 1.8 0.0018 E18.5 retina GGCAGCACAA (3) 50.9 0.0509 E18.5 retina GCTGCTGGTG (9) 34.6 0.0346 E18.5 retina CTGCAGCTAG (3) 7.3 0.0073 E18.5 retina GGACTCCTGG (5) 3.6 0.0036 P0.5 retina GGCAGCACAA (3) 19.6 0.0196 P0.5 retina CTGCAGCTAG (3) 9.8 0.0098 P0.5 retina GCTGCTGGTG (9) 5.9 0.0059 P0.5 retina CGTCTGGGAG 3.9 0.0039 P0.5 retina GGGGTAAGAA (2) 3.9 0.0039 P0.5 retina AATGGCTGCT 2 0.002 P0.5 retina ATGGAAATGG (3) 2 0.002 P2.5 retina GGCAGCACAA (3) 24.6 0.0246 P2.5 retina GCTGCTGGTG (9) 17.6 0.0176 P2.5 retina CTGCAGCTAG (3) 8.8 0.0088 P2.5 retina AATGGCTGCT 3.5 0.0035 P2.5 retina CAGTTATTTT (6) 3.5 0.0035 P2.5 retina GATTCAATTA 1.8 0.0018 P4.5 retina GGCAGCACAA (3) 31.7 0.0317 P4.5 retina GCTGCTGGTG (9) 19.8 0.0198 P4.5 retina CTGCAGCTAG (3) 15.9 0.0159 P4.5 retina AATGGCTGCT 2 0.002 P4.5 retina GCAGGTGAGA 2 0.002 P6.5 retina GGCAGCACAA (3) 26.7 0.0267 P6.5 retina GCTGCTGGTG (9) 15 0.015 P6.5 retina CTGCAGCTAG (3) 8.3 0.0083 P6.5 retina CAGTTATTTT (6) 5 0.005 P6.5 retina AATGGCTGCT 3.3 0.0033 P6.5 retina GGACTCCTGG (5) 3.3 0.0033 P6.5 retina GAGGGAGAGA (5) 1.7 0.0017 P6.5 retina GCAGGTGAGA 1.7 0.0017 P10.5 crx- retina GGCAGCACAA (3) 26 0.026 P10.5 crx- retina CTACAGCTAG 3.7 0.0037 P10.5 crx- retina GCTGCTGGTG (9) 3.7 0.0037 P10.5 crx- retina CGTCTGGGAG 1.9 0.0019 P10.5 crx- retina GGACTCCTGG (5) 1.9 0.0019 P10.5 crx- retina GGGGTAAGAA (2) 1.9 0.0019 P10.5 crx+ retina GCTGCTGGTG (9) 28.8 0.0288 P10.5 crx+ retina GGCAGCACAA (3) 25 0.025 P10.5 crx+ retina CTACAGCTAG 1.9 0.0019 Adult retinal GCTGCTGGTG (9) 11.1 0.0111 Adult retinal GGCAGCACAA (3) 11.1 0.0111 Adult retinal CTGCAGCTAG (3) 3.7 0.0037 ONL GGCAGCACAA (3) 24.9 0.0249 ONL GCTGCTGGTG (9) 13.4 0.0134 ONL CTGCAGCTAG (3) 3.8 0.0038