Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5083	Rab3a	RAB3A, member RAS oncogene family	8	8 32.6 cM	19339
Gene Ontology	exocytosis | GTP binding | GTPase activity | intracellular protein transport | protein binding | protein transport | protein transporter activity | regulation of exocytosis | small GTPase mediated signal transduction | synaptic vesicle | transport
Human Homolog	RAB3A[RAB3A, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCCTCTG (4) 6.5 0.0065 P8 Cb GC GAAGATGAGC (4) 4.9 0.0049 P8 Cb GC AGGTTTTTGT (5) 1.6 0.0016 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC GCCCAGAGCT (4) 1.6 0.0016 Cb medulloblastoma AAGCCCTCTG (4) 4.6 0.0046 P8 GC+1d culture AAGCCCTCTG (4) 14.8 0.0148 P8 GC+1d culture GAAGATGAGC (4) 5.7 0.0057 P8 GC+1d culture AGACCCTGCC (5) 1.1 0.0011 P8 GC+1d culture AGGTTTTTGT (5) 1.1 0.0011 P8 GC+SHH+1d culture AAGCCCTCTG (4) 5.9 0.0059 P8 GC+SHH+1d culture GAAGATGAGC (4) 5.9 0.0059 3T3 fibroblasts AAGCCCTCTG (4) 3.5 0.0035 3T3 fibroblasts AGACCCTGCC (5) 3.5 0.0035 E15 cortex GAAGATGAGC (4) 9.9 0.0099 E15 cortex AAGCCCTCTG (4) 4.9 0.0049 P1 cortex GAAGATGAGC (4) 13.6 0.0136 Hypothalamus GAAGATGAGC (4) 10.9 0.0109 Hypothalamus AAGCCCTCTG (4) 9.1 0.0091 Hypothalamus GCCCAGAGCT (4) 1.8 0.0018 E12.5 retina AGGTTTTTGT (5) 1.9 0.0019 E14.5 retina GCCCAGAGCT (4) 3.6 0.0036 E14.5 retina AAGCCCTCTG (4) 1.8 0.0018 E14.5 retina GAAGATGAGC (4) 1.8 0.0018 E16.5 retina AAGCCCTCTG (4) 1.8 0.0018 E16.5 retina AGACCCTGCC (5) 1.8 0.0018 E18.5 retina GAAGATGAGC (4) 1.8 0.0018 P0.5 retina GAAGATGAGC (4) 9.8 0.0098 P2.5 retina AGACCCTGCC (5) 3.5 0.0035 P2.5 retina AGGTTTTTGT (5) 1.8 0.0018 P2.5 retina GAAGATGAGC (4) 1.8 0.0018 P4.5 retina GAAGATGAGC (4) 5.9 0.0059 P4.5 retina AGACCCTGCC (5) 4 0.004 P4.5 retina AAGCCCTCTG (4) 2 0.002 P4.5 retina ATTCCGAATT (107) 2 0.002 P6.5 retina AAGCCCTCTG (4) 5 0.005 P6.5 retina GAAGATGAGC (4) 5 0.005 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P10.5 crx- retina ACGTCAGAAC 7.4 0.0074 P10.5 crx- retina AAGCCCTCTG (4) 5.6 0.0056 P10.5 crx- retina AGACCCTGCC (5) 3.7 0.0037 P10.5 crx- retina GAAGATGAGC (4) 1.9 0.0019 P10.5 crx+ retina AAGCCCTCTG (4) 3.8 0.0038 P10.5 crx+ retina AGACCCTGCC (5) 3.8 0.0038 P10.5 crx+ retina ACGTCAGAAC 1.9 0.0019 Adult retinal GAAGATGAGC (4) 14.8 0.0148 Adult retinal AAGCCCTCTG (4) 3.7 0.0037 Adult retinal AGACCCTGCC (5) 1.9 0.0019 Adult retinal AGGTTTTTGT (5) 1.9 0.0019 ONL GAAGATGAGC (4) 7.7 0.0077 ONL ATTCCGAATT (107) 3.8 0.0038 ONL AAGCCCTCTG (4) 1.9 0.0019 ONL AGACCCTGCC (5) 1.9 0.0019