Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5110	2610312E17Rik	RIKEN cDNA 2610312E17 gene	3		70465
Human Homolog	MEP50[MEP50 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 125 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTCTAGCTG (8) 6.5 0.0065 P8 Cb GC GAGGTGGAAT (4) 4.9 0.0049 P8 Cb GC GATTGTTACA (2) 3.3 0.0033 P8 Cb GC AATAAAAAAG (3) 1.6 0.0016 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GTTTTCCCCT (5) 1.6 0.0016 P8 Cb GC TGTGGAAGAA (3) 1.6 0.0016 P8 Cb GC TTGCCCTGCT (3) 1.6 0.0016 Cb medulloblastoma AATAAAAAAG (3) 9.2 0.0092 Cb medulloblastoma GAGGTGGAAT (4) 9.2 0.0092 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma TGTGGAAGAA (3) 4.6 0.0046 Cb medulloblastoma ATGACATTGT (2) 2.3 0.0023 Cb medulloblastoma GCTTCAAAAA (5) 2.3 0.0023 Cb medulloblastoma GTTTTCCCCT (5) 2.3 0.0023 Cb medulloblastoma TTGCCCTGCT (3) 2.3 0.0023 P8 GC+1d culture AATAAAAAAG (3) 5.7 0.0057 P8 GC+1d culture GAGGTGGAAT (4) 4.6 0.0046 P8 GC+1d culture GATTGTTACA (2) 3.4 0.0034 P8 GC+1d culture GTTTTCCCCT (5) 3.4 0.0034 P8 GC+1d culture ATGACATTGT (2) 2.3 0.0023 P8 GC+1d culture TCTCTAGCTG (8) 2.3 0.0023 P8 GC+1d culture GCTTCAAAAA (5) 1.1 0.0011 P8 GC+1d culture TCTGGGAATT 1.1 0.0011 P8 GC+1d culture TTGCCCTGCT (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture GAGGTGGAAT (4) 5.9 0.0059 P8 GC+SHH+1d culture TCTCTAGCTG (8) 4.7 0.0047 P8 GC+SHH+1d culture AATAAAAAAG (3) 2.3 0.0023 P8 GC+SHH+1d culture ATGACATTGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GATTGTTACA (2) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTCCCCT (5) 2.3 0.0023 P8 GC+SHH+1d culture TGTGGAAGAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TAGTCCAGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TCAATTTTCC (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts GAGGTGGAAT (4) 3.5 0.0035 3T3 fibroblasts TCTCTAGCTG (8) 3.5 0.0035 E15 cortex TCTCTAGCTG (8) 9.9 0.0099 E15 cortex GATTGTTACA (2) 4.9 0.0049 E15 cortex GTTTTCCCCT (5) 4.9 0.0049 E15 cortex TTGCCCTGCT (3) 4.9 0.0049 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex GTTTTCCCCT (5) 13.6 0.0136 P1 cortex GATTGTTACA (2) 4.5 0.0045 P1 cortex TAGTCCAGGC (3) 4.5 0.0045 P1 cortex TCTCTAGCTG (8) 4.5 0.0045 Hypothalamus GAGGTGGAAT (4) 9.1 0.0091 Hypothalamus AATAAAAAAG (3) 5.4 0.0054 Hypothalamus GTTTTCCCCT (5) 3.6 0.0036 Hypothalamus TCAATTTTCC (2) 1.8 0.0018 Hypothalamus TCTCTAGCTG (8) 1.8 0.0018 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina TCTGGGAATT 3.8 0.0038 E12.5 retina AATAAAAAAG (3) 1.9 0.0019 E12.5 retina GAGGTGGAAT (4) 1.9 0.0019 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina AATAAAAAAG (3) 3.6 0.0036 E14.5 retina ATGACATTGT (2) 3.6 0.0036 E14.5 retina GAGGTGGAAT (4) 1.8 0.0018 E14.5 retina TAGTCCAGGC (3) 1.8 0.0018 E14.5 retina TCTCTAGCTG (8) 1.8 0.0018 E16.5 retina AATAAAAAAG (3) 3.6 0.0036 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina GAGGTGGAAT (4) 3.6 0.0036 E16.5 retina GATTGTTACA (2) 1.8 0.0018 E16.5 retina TAGTCCAGGC (3) 1.8 0.0018 E18.5 retina GAGGTGGAAT (4) 7.3 0.0073 E18.5 retina TAGTCCAGGC (3) 3.6 0.0036 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina GCTTCAAAAA (5) 1.8 0.0018 E18.5 retina TCTCTAGCTG (8) 1.8 0.0018 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina TCTCTAGCTG (8) 5.9 0.0059 P0.5 retina ATGACATTGT (2) 3.9 0.0039 P0.5 retina GATTGTTACA (2) 3.9 0.0039 P0.5 retina AATAAAAAAG (3) 2 0.002 P0.5 retina TCAATTTTCC (2) 2 0.002 P2.5 retina AATAAAAAAG (3) 8.8 0.0088 P2.5 retina GAGGTGGAAT (4) 7 0.007 P2.5 retina TCTCTAGCTG (8) 7 0.007 P2.5 retina TGTGGAAGAA (3) 5.3 0.0053 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P4.5 retina TAGTCCAGGC (3) 5.9 0.0059 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina GAGGTGGAAT (4) 4 0.004 P4.5 retina GATTGTTACA (2) 4 0.004 P4.5 retina AATAAAAAAG (3) 2 0.002 P4.5 retina ATGACATTGT (2) 2 0.002 P4.5 retina TCTCTAGCTG (8) 2 0.002 P4.5 retina TGTGGAAGAA (3) 2 0.002 P6.5 retina TCTCTAGCTG (8) 10 0.01 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina GAGGTGGAAT (4) 5 0.005 P6.5 retina ATGACATTGT (2) 3.3 0.0033 P6.5 retina GATTGTTACA (2) 1.7 0.0017 P6.5 retina TAGTCCAGGC (3) 1.7 0.0017 P6.5 retina TTGCCCTGCT (3) 1.7 0.0017 P10.5 crx- retina GAGGTGGAAT (4) 9.3 0.0093 P10.5 crx- retina GTTTTCCCCT (5) 5.6 0.0056 P10.5 crx- retina TAGTCCAGGC (3) 5.6 0.0056 P10.5 crx- retina AATAAAAAAG (3) 3.7 0.0037 P10.5 crx- retina ATGACATTGT (2) 3.7 0.0037 P10.5 crx- retina TGTGGAAGAA (3) 3.7 0.0037 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina GATTGTTACA (2) 1.9 0.0019 P10.5 crx- retina TCTCTAGCTG (8) 1.9 0.0019 P10.5 crx- retina TCTGGGAATT 1.9 0.0019 P10.5 crx+ retina TAGTCCAGGC (3) 5.8 0.0058 P10.5 crx+ retina TCTCTAGCTG (8) 5.8 0.0058 P10.5 crx+ retina GATTGTTACA (2) 3.8 0.0038 P10.5 crx+ retina TTGCCCTGCT (3) 3.8 0.0038 P10.5 crx+ retina AATAAAAAAG (3) 1.9 0.0019 P10.5 crx+ retina GAGGTGGAAT (4) 1.9 0.0019 Adult retinal TCTCTAGCTG (8) 7.4 0.0074 Adult retinal AATAAAAAAG (3) 3.7 0.0037 Adult retinal TAGTCCAGGC (3) 3.7 0.0037 Adult retinal ATGACATTGT (2) 1.9 0.0019 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal TGTGGAAGAA (3) 1.9 0.0019 ONL AATAAAAAAG (3) 3.8 0.0038 ONL CCTTTAATTC (36) 3.8 0.0038 ONL TCTCTAGCTG (8) 3.8 0.0038 ONL GTATCTATGT (2) 1.9 0.0019 ONL TTGCCCTGCT (3) 1.9 0.0019