Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.51988
1110054O05Rik
RIKEN cDNA 1110054O05 gene
4
66209
Mm.51988
2610312O17Rik
RIKEN cDNA 2610312O17 gene
4
67176
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
CAGTGGTGGT
(
2
)
1.6
0.0016
P8 Cb GC
CCTGTGATCT
(
8
)
1.6
0.0016
P8 Cb GC
TGCCACCACA (
19
)
1.6
0.0016
P8 Cb GC
TTGCTGCAGA
(
4
)
1.6
0.0016
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
ATTAAAATTC
(
2
)
2.3
0.0023
P8 GC+1d culture
ATTAAAATTC
(
2
)
1.1
0.0011
P8 GC+1d culture
CAGTGGTGGT
(
2
)
1.1
0.0011
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
TGCCACCACA (
19
)
1.2
0.0012
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
TGCCACCACA (
19
)
3.5
0.0035
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
Hypothalamus
TGCCACCACA (
19
)
5.4
0.0054
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
TGCCACCACA (
19
)
1.9
0.0019
E14.5 retina
TGCCACCACA (
19
)
9.1
0.0091
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
ATTAAAATTT
(
3
)
1.8
0.0018
E14.5 retina
CAGTGGTGGT
(
2
)
1.8
0.0018
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
ATTAAAATTC
(
2
)
1.8
0.0018
E16.5 retina
ATTAAAATTT
(
3
)
1.8
0.0018
E16.5 retina
CAGTGGTGGT
(
2
)
1.8
0.0018
E16.5 retina
CCTGTGATCT
(
8
)
1.8
0.0018
E16.5 retina
TGATACAGAG
(
5
)
1.8
0.0018
E18.5 retina
ATTAAAATTT
(
3
)
1.8
0.0018
E18.5 retina
CAGTGGTGGT
(
2
)
1.8
0.0018
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
E18.5 retina
TGATACAGAG
(
5
)
1.8
0.0018
P0.5 retina
TGCCACCACA (
19
)
13.7
0.0137
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P0.5 retina
CAGTGGTGGT
(
2
)
2
0.002
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
ATTAAAATTC
(
2
)
1.8
0.0018
P2.5 retina
TGCCACCACA (
19
)
1.8
0.0018
P2.5 retina
TTGCTGCAGA
(
4
)
1.8
0.0018
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P4.5 retina
ATTAAAATTC
(
2
)
2
0.002
P6.5 retina
CTGTTGGCTA (
4
)
10
0.01
P6.5 retina
TGCCACCACA (
19
)
8.3
0.0083
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P6.5 retina
TGATACAGAG
(
5
)
1.7
0.0017
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx- retina
CCTGTGATCT
(
8
)
3.7
0.0037
P10.5 crx- retina
TGCCACCACA (
19
)
3.7
0.0037
P10.5 crx- retina
CAGTGGTGGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGTTGGCTA (
4
)
19.2
0.0192
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
TGCCACCACA (
19
)
1.9
0.0019
P10.5 crx+ retina
TTGCTGCAGA
(
4
)
1.9
0.0019
Adult retinal
CTGTTGGCTA (
4
)
68.5
0.0685
Adult retinal
TGCCACCACA (
19
)
5.6
0.0056
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
ONL
CTGTTGGCTA (
4
)
51.7
0.0517
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
TGATACAGAG
(
5
)
3.8
0.0038
ONL
CCTGTGATCT
(
8
)
1.9
0.0019
ONL
TGCCACCACA (
19
)
1.9
0.0019
