Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.52265
Cys1
cystin 1
12
12 9.0 cM
12879
Gene Ontology
axoneme
|
biological_process unknown
|
molecular_function unknown
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
GAATCATTTG (
5
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
GAATCATTTG (
5
)
6.9
0.0069
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GAGTGTCTAC
3.5
0.0035
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
GAGTGTCTAC
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
GAATCATTTG (
5
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
GAGTGTCTAC
3.7
0.0037
ONL
TGTGTGTGTG (
115
)
23
0.023
