Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.52526
1700008N02Rik
RIKEN cDNA 1700008N02 gene
18
76391
Mm.52526
2810439F02Rik
RIKEN cDNA 2810439F02 gene
18
72747
Human Homolog
C18orf17[chromosome 18 open reading frame 17]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTTTTTAAA (
10
)
6.5
0.0065
P8 Cb GC
TTTAAAAAGA (
5
)
3.3
0.0033
P8 Cb GC
ACTGTATTGA
(
2
)
1.6
0.0016
P8 Cb GC
TAGCTATGGA
(
2
)
1.6
0.0016
Cb medulloblastoma
GTTTTTTAAA (
10
)
9.2
0.0092
Cb medulloblastoma
TAGCTATGGA
(
2
)
4.6
0.0046
P8 GC+1d culture
GTTTTTTAAA (
10
)
11.4
0.0114
P8 GC+1d culture
TTTAAAAAGA (
5
)
2.3
0.0023
P8 GC+1d culture
TAGCTATGGA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTTTTTAAA (
10
)
14.1
0.0141
P8 GC+SHH+1d culture
TAGCTATGGA
(
2
)
3.5
0.0035
E15 cortex
GTTTTTTAAA (
10
)
4.9
0.0049
P1 cortex
GTTTTTTAAA (
10
)
4.5
0.0045
Hypothalamus
TAGCTATGGA
(
2
)
9.1
0.0091
Hypothalamus
ATGACAAAGT
(
2
)
1.8
0.0018
Hypothalamus
GTTTTTTAAA (
10
)
1.8
0.0018
E12.5 retina
GTTTTTTAAA (
10
)
11.3
0.0113
E12.5 retina
TAGCTATGGA
(
2
)
3.8
0.0038
E12.5 retina
TTTAAAAAGA (
5
)
1.9
0.0019
E14.5 retina
GTTTTTTAAA (
10
)
9.1
0.0091
E14.5 retina
ATTGAACTCA
(
5
)
3.6
0.0036
E14.5 retina
TAGCTATGGA
(
2
)
1.8
0.0018
E16.5 retina
GTTTTTTAAA (
10
)
5.4
0.0054
E18.5 retina
GTTTTTTAAA (
10
)
9.1
0.0091
P0.5 retina
GTTTTTTAAA (
10
)
5.9
0.0059
P0.5 retina
TAGCTATGGA
(
2
)
2
0.002
P2.5 retina
GTTTTTTAAA (
10
)
15.8
0.0158
P2.5 retina
TAGCTATGGA
(
2
)
3.5
0.0035
P2.5 retina
TTTAAAAAGA (
5
)
1.8
0.0018
P4.5 retina
GTTTTTTAAA (
10
)
17.8
0.0178
P4.5 retina
TAGCTATGGA
(
2
)
4
0.004
P6.5 retina
GTTTTTTAAA (
10
)
6.7
0.0067
P6.5 retina
TTTAAAAAGA (
5
)
3.3
0.0033
P6.5 retina
ATGACAAAGT
(
2
)
1.7
0.0017
P10.5 crx- retina
GTTTTTTAAA (
10
)
3.7
0.0037
P10.5 crx- retina
TAGCTATGGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTTTTTTAAA (
10
)
9.6
0.0096
P10.5 crx+ retina
TAGCTATGGA
(
2
)
5.8
0.0058
P10.5 crx+ retina
ATGACAAAGT
(
2
)
3.8
0.0038
P10.5 crx+ retina
ATTGAACTCA
(
5
)
1.9
0.0019
Adult retinal
TAGCTATGGA
(
2
)
5.6
0.0056
Adult retinal
GTTTTTTAAA (
10
)
3.7
0.0037
ONL
GTTTTTTAAA (
10
)
9.6
0.0096
ONL
ACTGTATTGA
(
2
)
3.8
0.0038
ONL
ATGACAAAGT
(
2
)
1.9
0.0019
ONL
TAGCTATGGA
(
2
)
1.9
0.0019
