Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5309	Gabrg2	gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2	11	11 19.0 cM	14406
Gene Ontology	chloride transport | extracellular ligand-gated ion channel activity | GABA-A receptor activity | gamma-aminobutyric acid signaling pathway | integral to membrane | integral to plasma membrane | ion channel activity | ion transport | membrane | neurotransmitter receptor activity | postsynaptic membrane | protein binding | receptor activity | synaptic transmission | transport
Human Homolog	GABRG2[gamma-aminobutyric acid (GABA) A receptor, gamma 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAACATCA (2) 3.3 0.0033 P8 Cb GC GAAATAAAAA (3) 3.3 0.0033 P8 Cb GC GTACAAAAAT (4) 3.3 0.0033 P8 Cb GC CATTAAACCT (4) 1.6 0.0016 Cb medulloblastoma GTACAAAAAT (4) 13.9 0.0139 Cb medulloblastoma GAAATAAAAA (3) 4.6 0.0046 Cb medulloblastoma TGTATAACAC 2.3 0.0023 Cb medulloblastoma TTATCATCAA (4) 2.3 0.0023 P8 GC+1d culture GTACAAAAAT (4) 10.3 0.0103 P8 GC+1d culture AGCAACATCA (2) 9.1 0.0091 P8 GC+SHH+1d culture AGCAACATCA (2) 14.1 0.0141 P8 GC+SHH+1d culture GTACAAAAAT (4) 9.4 0.0094 P8 GC+SHH+1d culture GAAATAAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTATCATCAT 2.3 0.0023 3T3 fibroblasts GTACAAAAAT (4) 3.5 0.0035 E15 cortex GTACAAAAAT (4) 4.9 0.0049 P1 cortex AGCAACATCA (2) 4.5 0.0045 Hypothalamus GTACAAAAAT (4) 5.4 0.0054 Hypothalamus AGCAACATCA (2) 3.6 0.0036 Hypothalamus TTATCATCAA (4) 3.6 0.0036 Hypothalamus CATTAAACCT (4) 1.8 0.0018 Hypothalamus TGTATAACAC 1.8 0.0018 E12.5 retina GTACAAAAAT (4) 1.9 0.0019 E12.5 retina GTCACTGGGA (4) 1.9 0.0019 E14.5 retina GTCACTGGGA (4) 3.6 0.0036 E14.5 retina GAAATAAAAA (3) 1.8 0.0018 E14.5 retina GGAAAATGAG 1.8 0.0018 E14.5 retina GTACAAAAAT (4) 1.8 0.0018 E14.5 retina TTATCATCAT 1.8 0.0018 E16.5 retina GGAAAATGAG 5.4 0.0054 E16.5 retina GTCACTGGGA (4) 5.4 0.0054 E16.5 retina TGTATAACAC 3.6 0.0036 E16.5 retina AGCAACATCA (2) 1.8 0.0018 E16.5 retina GTACAAAAAT (4) 1.8 0.0018 E18.5 retina GTACAAAAAT (4) 9.1 0.0091 E18.5 retina GTCACTGGGA (4) 5.5 0.0055 E18.5 retina TTATCATCAA (4) 3.6 0.0036 E18.5 retina GAAATAAAAA (3) 1.8 0.0018 E18.5 retina TTATCATCAT 1.8 0.0018 P0.5 retina GTACAAAAAT (4) 3.9 0.0039 P2.5 retina GTACAAAAAT (4) 8.8 0.0088 P2.5 retina CATTAAACCT (4) 3.5 0.0035 P2.5 retina TGAGGAAAAC 1.8 0.0018 P2.5 retina TTATCATCAA (4) 1.8 0.0018 P2.5 retina TTATCATCAT 1.8 0.0018 P4.5 retina GAAATAAAAA (3) 4 0.004 P4.5 retina GTCACTGGGA (4) 4 0.004 P4.5 retina GTACAAAAAT (4) 2 0.002 P4.5 retina TTATCATCAT 2 0.002 P6.5 retina GTACAAAAAT (4) 6.7 0.0067 P6.5 retina GTCACTGGGA (4) 3.3 0.0033 P6.5 retina AGCAACATCA (2) 1.7 0.0017 P6.5 retina TGAGGAAAAC 1.7 0.0017 P6.5 retina TGTATAACAC 1.7 0.0017 P6.5 retina TTATCATCAA (4) 1.7 0.0017 P10.5 crx- retina GTACAAAAAT (4) 14.9 0.0149 P10.5 crx- retina GAAATAAAAA (3) 3.7 0.0037 P10.5 crx- retina AGCAACATCA (2) 1.9 0.0019 P10.5 crx- retina TGTATAACAC 1.9 0.0019 P10.5 crx+ retina GGAAAATGAG 1.9 0.0019 P10.5 crx+ retina GTCACTGGGA (4) 1.9 0.0019 P10.5 crx+ retina TTATCATCAT 1.9 0.0019 Adult retinal GTACAAAAAT (4) 5.6 0.0056 Adult retinal TGTATAACAC 1.9 0.0019 ONL AGCAACATCA (2) 9.6 0.0096 ONL GAAATAAAAA (3) 1.9 0.0019 ONL TGAGGAAAAC 1.9 0.0019