Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.53849
2900054J07Rik
RIKEN cDNA 2900054J07 gene
13
72958
Gene Ontology
intracellular
|
nucleic acid binding
|
regulation of transcription, DNA-dependent
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAACATCT (
6
)
53.8
0.0538
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
GGTTTCCCCC
(
6
)
1.6
0.0016
Cb medulloblastoma
CTGAACATCT (
6
)
6.9
0.0069
Cb medulloblastoma
CAGATAAGTC
(
2
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
CTGAACATCT (
6
)
76.5
0.0765
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+SHH+1d culture
CTGAACATCT (
6
)
66.7
0.0667
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
GGTTTCCCCC
(
6
)
1.2
0.0012
3T3 fibroblasts
CTGAACATCT (
6
)
147.2
0.1472
E15 cortex
CTGAACATCT (
6
)
54.4
0.0544
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
CTGAACATCT (
6
)
72.7
0.0727
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
CTGAACATCT (
6
)
9.1
0.0091
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
E12.5 retina
CTGAACATCT (
6
)
46.9
0.0469
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
GGTTTCCCCC
(
6
)
1.9
0.0019
E14.5 retina
CTGAACATCT (
6
)
36.4
0.0364
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
CTGAACATCT (
6
)
25.4
0.0254
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
CAGATAAGTC
(
2
)
1.8
0.0018
E18.5 retina
CTGAACATCT (
6
)
29.1
0.0291
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
P0.5 retina
CTGAACATCT (
6
)
94.2
0.0942
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P2.5 retina
CTGAACATCT (
6
)
28.2
0.0282
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P4.5 retina
CTGAACATCT (
6
)
25.8
0.0258
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P6.5 retina
CTGAACATCT (
6
)
30
0.03
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
CAGATAAGTC
(
2
)
1.7
0.0017
P10.5 crx- retina
CTGAACATCT (
6
)
11.1
0.0111
P10.5 crx+ retina
CTGAACATCT (
6
)
7.7
0.0077
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
CTGAACATCT (
6
)
14.8
0.0148
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
CTGAACATCT (
6
)
1.9
0.0019
