Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5400	Brd7	bromodomain containing 7	8	8 C3	26992
Gene Ontology	histone binding | nucleus | nucleus | protein binding | regulation of transcription from Pol II promoter | transcription factor binding
Human Homolog	BRD7[bromodomain containing 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCAAAAAA (12) 3.3 0.0033 P8 Cb GC TCATCTCCTG (3) 3.3 0.0033 P8 Cb GC TCCCTATAAG 3.3 0.0033 Cb medulloblastoma TCCCTATAAG 2.3 0.0023 P8 GC+1d culture TCCCTATAAG 5.7 0.0057 P8 GC+1d culture TCATCTCCTG (3) 2.3 0.0023 P8 GC+SHH+1d culture CCTCAAAAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture TCATCTCCTG (3) 2.3 0.0023 P8 GC+SHH+1d culture TGGGACACAG (6) 1.2 0.0012 3T3 fibroblasts TCCCTATAAG 21 0.021 3T3 fibroblasts AAACAATGGA (6) 3.5 0.0035 E15 cortex TCATCTCCTG (3) 4.9 0.0049 P1 cortex TCCCTATAAG 13.6 0.0136 P1 cortex TCCCTATAAA (2) 4.5 0.0045 Hypothalamus AAACAATGGA (6) 1.8 0.0018 E12.5 retina CCTCAAAAAA (12) 5.6 0.0056 E12.5 retina TCCCTATAAG 3.8 0.0038 E12.5 retina TCCCTATAAA (2) 1.9 0.0019 E12.5 retina TGGGAGAGCA (2) 1.9 0.0019 E14.5 retina AAACAATGGA (6) 1.8 0.0018 E16.5 retina TCCCTATAAG 5.4 0.0054 E16.5 retina CCTCAAAAAA (12) 1.8 0.0018 E16.5 retina TGGGACACAG (6) 1.8 0.0018 E18.5 retina TCCCTATAAG 1.8 0.0018 E18.5 retina TGGGACACAG (6) 1.8 0.0018 P0.5 retina TCCCTATAAG 25.5 0.0255 P0.5 retina AAACAATGGA (6) 3.9 0.0039 P0.5 retina TCATCTCCTG (3) 3.9 0.0039 P0.5 retina TCCCTATAAA (2) 2 0.002 P2.5 retina TGGGAGAGCA (2) 5.3 0.0053 P2.5 retina CCTCAAAAAA (12) 3.5 0.0035 P4.5 retina CCTCAAAAAA (12) 2 0.002 P4.5 retina TCCCTATAAG 2 0.002 P6.5 retina TCCCTATAAG 6.7 0.0067 P6.5 retina CCTCAAAAAA (12) 1.7 0.0017 P10.5 crx- retina TCATCTCCTG (3) 3.7 0.0037 P10.5 crx- retina TCCCTATAAG 1.9 0.0019 P10.5 crx- retina TGGGACACAG (6) 1.9 0.0019 P10.5 crx+ retina CCTCAAAAAA (12) 1.9 0.0019 P10.5 crx+ retina TCCCTATAAG 1.9 0.0019 Adult retinal TCCCTATAAG 35.2 0.0352 Adult retinal TCCCTATAAA (2) 9.3 0.0093 Adult retinal TGGGACACAG (6) 1.9 0.0019 ONL TCCCTATAAG 9.6 0.0096 ONL CCTCAAAAAA (12) 1.9 0.0019