Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.55075
Lss
lanosterol synthase
10
10 41.1 cM
16987
Mm.55075
4930483K19Rik
RIKEN cDNA 4930483K19 gene
10
74953
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
AAACCAAAAA (
7
)
4.9
0.0049
P8 Cb GC
GTACATAGAC
(
2
)
1.6
0.0016
P8 Cb GC
TTCTGAAGTA
(
2
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GAGATGGCTC (
3
)
9.2
0.0092
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GTACATAGAC
(
2
)
3.4
0.0034
P8 GC+1d culture
TTCTGAAGTA
(
2
)
2.3
0.0023
P8 GC+1d culture
AAACCAAAAA (
7
)
1.1
0.0011
P8 GC+1d culture
GAGATGGCTC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GTACATAGAC
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
AAACCAAAAA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGATGGCTC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCTGAAGTA
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TTCTGAAGTA
(
2
)
9.1
0.0091
P1 cortex
AAACCAAAAA (
7
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
AAACCAAAAA (
7
)
3.6
0.0036
Hypothalamus
GAGATGGCTC (
3
)
3.6
0.0036
Hypothalamus
TTCTGAAGTA
(
2
)
3.6
0.0036
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
GAGATGGCTC (
3
)
7.5
0.0075
E12.5 retina
AAACCAAAAA (
7
)
5.6
0.0056
E12.5 retina
GTACATAGAC
(
2
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GAGATGGCTC (
3
)
3.6
0.0036
E14.5 retina
GTACATAGAC
(
2
)
3.6
0.0036
E14.5 retina
TTCTGAAGTA
(
2
)
3.6
0.0036
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GTACATAGAC
(
2
)
5.4
0.0054
E16.5 retina
GAGATGGCTC (
3
)
3.6
0.0036
E16.5 retina
AAACCAAAAA (
7
)
1.8
0.0018
E16.5 retina
TTCTGAAGTA
(
2
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
AAACCAAAAA (
7
)
5.5
0.0055
E18.5 retina
TTCTGAAGTA
(
2
)
5.5
0.0055
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GAGATGGCTC (
3
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
GAGATGGCTC (
3
)
1.8
0.0018
P2.5 retina
TTCTGAAGTA
(
2
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TTCTGAAGTA
(
2
)
4
0.004
P4.5 retina
GAGATGGCTC (
3
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GAGATGGCTC (
3
)
1.7
0.0017
P6.5 retina
TTCTGAAGTA
(
2
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
GAGATGGCTC (
3
)
7.7
0.0077
P10.5 crx+ retina
TTCTGAAGTA
(
2
)
3.8
0.0038
P10.5 crx+ retina
GTACATAGAC
(
2
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TTCTGAAGTA
(
2
)
5.6
0.0056
Adult retinal
AAACCAAAAA (
7
)
3.7
0.0037
Adult retinal
GTACATAGAC
(
2
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GAGATGGCTC (
3
)
1.9
0.0019
ONL
GTACATAGAC
(
2
)
1.9
0.0019
