Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.55143	Dkk3	dickkopf homolog 3 (Xenopus laevis)	7	7 E3	50781
Gene Ontology	development | extracellular | extracellular space | extracellular space | negative regulation of Wnt receptor signaling pathway | Wnt receptor signaling pathway
Human Homolog	DKK3[dickkopf homolog 3 (Xenopus laevis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 21 In Situ Hybridization Images

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SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CTGTGACACA (3) 1.6 0.0016 P8 Cb GC GCGGGTAAAG (3) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma ACACAGTGAG (2) 2.3 0.0023 Cb medulloblastoma GGAGCGCTAT 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CTGTGACACA (3) 1.2 0.0012 P8 GC+SHH+1d culture GCGGGTAAAG (3) 1.2 0.0012 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GCGGGTAAAG (3) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex GCGGGTAAAG (3) 4.5 0.0045 P1 cortex TCTATGAGGT (2) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus GCGGGTAAAG (3) 3.6 0.0036 Hypothalamus GGCTGAGGCA (2) 3.6 0.0036 Hypothalamus CAAAAAAATT (3) 1.8 0.0018 Hypothalamus CTCTCTCTCT (3) 1.8 0.0018 Hypothalamus GGAGCGCTAT 1.8 0.0018 Hypothalamus TCTATGAGGT (2) 1.8 0.0018 Hypothalamus TCTTGGAACA (2) 1.8 0.0018 E12.5 retina GGAGCGCTAT 80.7 0.0807 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina GCGGGTAAAG (3) 9.4 0.0094 E12.5 retina CAAGTCAGCC (2) 3.8 0.0038 E12.5 retina ATGGATTTGG 1.9 0.0019 E12.5 retina TCTTGGAACA (2) 1.9 0.0019 E14.5 retina GGAGCGCTAT 38.3 0.0383 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina TCTTGGAACA (2) 5.5 0.0055 E14.5 retina GCGGGTAAAG (3) 3.6 0.0036 E14.5 retina CTCTCTCTCT (3) 1.8 0.0018 E14.5 retina TGCACCCAGG 1.8 0.0018 E16.5 retina GGAGCGCTAT 50.7 0.0507 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina TCTTGGAACA (2) 5.4 0.0054 E16.5 retina CTCTCTCTCT (3) 3.6 0.0036 E16.5 retina GCGGGTAAAG (3) 3.6 0.0036 E16.5 retina CAAAAAAATT (3) 1.8 0.0018 E16.5 retina CACAAACCAC (3) 1.8 0.0018 E16.5 retina CTGTGACACA (3) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina GGAGCGCTAT 41.8 0.0418 E18.5 retina CAAAAAAATT (3) 3.6 0.0036 E18.5 retina CACAAACCAC (3) 1.8 0.0018 E18.5 retina GCGGGTAAAG (3) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina GGAGCGCTAT 60.8 0.0608 P0.5 retina CAAAAAAATT (3) 2 0.002 P0.5 retina TCTTGGAACA (2) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina GGAGCGCTAT 44 0.044 P2.5 retina CAAGTCAGCC (2) 3.5 0.0035 P2.5 retina GCGGGTAAAG (3) 3.5 0.0035 P2.5 retina TCTTGGAACA (2) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina GGAGCGCTAT 27.7 0.0277 P4.5 retina GCGGGTAAAG (3) 7.9 0.0079 P4.5 retina ACACAGTGAG (2) 4 0.004 P4.5 retina CAAGTCAGCC (2) 2 0.002 P4.5 retina TCTATGAGGT (2) 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GGAGCGCTAT 26.7 0.0267 P6.5 retina GCGGGTAAAG (3) 16.7 0.0167 P6.5 retina TGCACCCAGG 3.3 0.0033 P10.5 crx- retina GGAGCGCTAT 70.6 0.0706 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina ACACAGTGAG (2) 1.9 0.0019 P10.5 crx- retina CTCTCTCTCT (3) 1.9 0.0019 P10.5 crx- retina TCTTGGAACA (2) 1.9 0.0019 P10.5 crx+ retina GGAGCGCTAT 46.1 0.0461 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina GCGGGTAAAG (3) 3.8 0.0038 P10.5 crx+ retina CAAAAAAATT (3) 1.9 0.0019 P10.5 crx+ retina CAAGTCAGCC (2) 1.9 0.0019 P10.5 crx+ retina GGCTGAGGCA (2) 1.9 0.0019 P10.5 crx+ retina TCTATGAGGT (2) 1.9 0.0019 P10.5 crx+ retina TGCAACAGGA 1.9 0.0019 Adult retinal GGAGCGCTAT 37 0.037 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GCGGGTAAAG (3) 1.9 0.0019 Adult retinal TGCAACAGGA 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL GGAGCGCTAT 9.6 0.0096 ONL ATGGATTTGG 5.7 0.0057 ONL CACAAACCAC (3) 1.9 0.0019 ONL GCGGGTAAAG (3) 1.9 0.0019 ONL TCTATGAGGT (2) 1.9 0.0019 ONL TGCACCCAGG 1.9 0.0019