Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.565	Sptlc2	serine palmitoyltransferase, long chain base subunit 2	12		20773
Gene Ontology	acyltransferase activity | biosynthesis | endoplasmic reticulum | integral to membrane | metabolism | serine C-palmitoyltransferase activity | transaminase activity | transferase activity
Human Homolog	SPTLC2[serine palmitoyltransferase, long chain base subunit 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGCTAAAC (5) 3.3 0.0033 P8 Cb GC TAAGAATAAA (4) 1.6 0.0016 P8 Cb GC TGAAAGACAT 1.6 0.0016 Cb medulloblastoma CACTCTGAAA (2) 4.6 0.0046 Cb medulloblastoma GGGGCCACTT (4) 4.6 0.0046 Cb medulloblastoma TAAGAATAAA (4) 4.6 0.0046 Cb medulloblastoma CAGGCTAAAC (5) 2.3 0.0023 P8 GC+1d culture TGAAAGACAT 4.6 0.0046 P8 GC+1d culture CTGGTTGCTG (6) 2.3 0.0023 P8 GC+1d culture TAAGAATAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture TAAGAATAAA (4) 5.9 0.0059 P8 GC+SHH+1d culture TGAAAGACAT 2.3 0.0023 P8 GC+SHH+1d culture CTGGTTGCTG (6) 1.2 0.0012 3T3 fibroblasts CTGGTTGCTG (6) 3.5 0.0035 3T3 fibroblasts GGGGCCACTT (4) 3.5 0.0035 E15 cortex GGGGCCACTT (4) 9.9 0.0099 P1 cortex CAGGCTAAAC (5) 4.5 0.0045 P1 cortex GGGGCCACTT (4) 4.5 0.0045 P1 cortex TAAGAATAAA (4) 4.5 0.0045 P1 cortex TTAAGAAATA (2) 4.5 0.0045 Hypothalamus TAAGAATAAA (4) 9.1 0.0091 Hypothalamus CTGGTTGCTG (6) 7.2 0.0072 Hypothalamus GGGGCCACTT (4) 7.2 0.0072 Hypothalamus GAAATCCCTT (6) 1.8 0.0018 Hypothalamus GGGCAGGATG (5) 1.8 0.0018 Hypothalamus TGAAAGACAT 1.8 0.0018 Hypothalamus TTAAGAAATA (2) 1.8 0.0018 E12.5 retina TAAGAATAAA (4) 1.9 0.0019 E14.5 retina CAGGCTAAAC (5) 1.8 0.0018 E14.5 retina CTGGTTGCTG (6) 1.8 0.0018 E14.5 retina TTAAGAAATA (2) 1.8 0.0018 E16.5 retina TGAAAGACAT 3.6 0.0036 E16.5 retina CTGGTTGCTG (6) 1.8 0.0018 E18.5 retina CACTCTGAAA (2) 3.6 0.0036 E18.5 retina CAGGCTAAAC (5) 1.8 0.0018 E18.5 retina GGGGCCACTT (4) 1.8 0.0018 E18.5 retina TAAGAATAAA (4) 1.8 0.0018 E18.5 retina TGAAAGACAT 1.8 0.0018 E18.5 retina TTAAGAAATA (2) 1.8 0.0018 P0.5 retina GGGGCCACTT (4) 3.9 0.0039 P0.5 retina CACTCTGAAA (2) 2 0.002 P0.5 retina CTGGTTGCTG (6) 2 0.002 P0.5 retina GAAATCCCTT (6) 2 0.002 P0.5 retina TTAAGAAATA (2) 2 0.002 P2.5 retina GGGGCCACTT (4) 1.8 0.0018 P2.5 retina TGAAAGACAT 1.8 0.0018 P4.5 retina GGGGCCACTT (4) 4 0.004 P4.5 retina TAAGAATAAA (4) 4 0.004 P4.5 retina TGAAAGACAT 4 0.004 P6.5 retina TAAGAATAAA (4) 3.3 0.0033 P6.5 retina GAAATCCCTT (6) 1.7 0.0017 P6.5 retina GGGCAGGATG (5) 1.7 0.0017 P10.5 crx- retina CTGGTTGCTG (6) 7.4 0.0074 P10.5 crx- retina GGGGCCACTT (4) 7.4 0.0074 P10.5 crx- retina TGAAAGACAT 3.7 0.0037 P10.5 crx- retina TAAGAATAAA (4) 1.9 0.0019 P10.5 crx+ retina CTGGTTGCTG (6) 3.8 0.0038 P10.5 crx+ retina GGGGCCACTT (4) 3.8 0.0038 P10.5 crx+ retina CACTCTGAAA (2) 1.9 0.0019 P10.5 crx+ retina GGGCAGGATG (5) 1.9 0.0019 P10.5 crx+ retina TAAGAATAAA (4) 1.9 0.0019 Adult retinal GGGGCCACTT (4) 11.1 0.0111 Adult retinal TGAAAGACAT 1.9 0.0019 ONL TAAGAATAAA (4) 3.8 0.0038 ONL GGGGCCACTT (4) 1.9 0.0019