Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.566	Orc5l	origin recognition complex, subunit 5-like (S. cerevisiae)	5		26429
Gene Ontology	ATP binding | DNA replication | nucleus
Human Homolog	ORC5L[origin recognition complex, subunit 5-like (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GCGCCGAAAG (3) 13.1 0.0131 P8 Cb GC GCGCCGCAGA (4) 4.9 0.0049 P8 Cb GC ATCATCCTCC (2) 3.3 0.0033 P8 Cb GC TCTAACTCTG (6) 3.3 0.0033 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GCGCCGCAGA (4) 9.2 0.0092 Cb medulloblastoma GCGCCGAAAG (3) 6.9 0.0069 Cb medulloblastoma AAGCTGCTGT 2.3 0.0023 Cb medulloblastoma ATCATCCTCC (2) 2.3 0.0023 Cb medulloblastoma TAATGATATT (3) 2.3 0.0023 Cb medulloblastoma TCTAACTCTG (6) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TCTAACTCTG (6) 4.6 0.0046 P8 GC+1d culture GCGCCGCAGA (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TCTAACTCTG (6) 7 0.007 P8 GC+SHH+1d culture GCGCCGAAAG (3) 5.9 0.0059 P8 GC+SHH+1d culture TAATGATATT (3) 3.5 0.0035 P8 GC+SHH+1d culture GCGCCGCAGA (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GCGCCGAAAG (3) 21 0.021 3T3 fibroblasts GCGCCGCAGA (4) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GCGCCGAAAG (3) 14.8 0.0148 E15 cortex GCGCCGCAGA (4) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GCGCCGAAAG (3) 5.4 0.0054 Hypothalamus TAATGATATT (3) 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GCGCCGAAAG (3) 9.4 0.0094 E12.5 retina GCGCCGCAGA (4) 3.8 0.0038 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TCTAACTCTG (6) 3.6 0.0036 E14.5 retina TTTTGAGAAA (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TCTAACTCTG (6) 3.6 0.0036 E16.5 retina TAATGATATT (3) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TCTAACTCTG (6) 5.5 0.0055 E18.5 retina GCGCCGAAAG (3) 3.6 0.0036 E18.5 retina GCGCCGCAGA (4) 3.6 0.0036 E18.5 retina TAATGATATT (3) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GCGCCGAAAG (3) 11.8 0.0118 P0.5 retina GCGCCGCAGA (4) 2 0.002 P0.5 retina TTTTGAGAAA (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GCGCCGAAAG (3) 7 0.007 P2.5 retina TCTAACTCTG (6) 3.5 0.0035 P2.5 retina GAAGCAAATC 1.8 0.0018 P2.5 retina TAATGATATT (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GAAGCAAATC 4 0.004 P4.5 retina TCTAACTCTG (6) 4 0.004 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TTTTGAGAAA (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AAGCTGCTGT 5.6 0.0056 P10.5 crx- retina TCTAACTCTG (6) 5.6 0.0056 P10.5 crx- retina GCGCCGAAAG (3) 1.9 0.0019 P10.5 crx- retina TAATGATATT (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TCTAACTCTG (6) 5.8 0.0058 P10.5 crx+ retina GAAGCAAATC 3.8 0.0038 P10.5 crx+ retina GCGCCGAAAG (3) 3.8 0.0038 P10.5 crx+ retina TAATGATATT (3) 3.8 0.0038 P10.5 crx+ retina ATCATCCTCC (2) 1.9 0.0019 P10.5 crx+ retina GCGCCGCAGA (4) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GCGCCGAAAG (3) 9.3 0.0093 Adult retinal TAATGATATT (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TAATGATATT (3) 7.7 0.0077 ONL GCGCCGAAAG (3) 3.8 0.0038 ONL TCTAACTCTG (6) 1.9 0.0019