Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.5718
Pik4ca
phosphatidylinositol 4-kinase, catalytic, alpha polypeptide
16
224020
Mm.5718
C78549
expressed sequence C78549
16
98013
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TACCACCACA
(
6
)
3.3
0.0033
P8 Cb GC
AAAAAAATAA
(
7
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAAAAAATAA
(
7
)
13.9
0.0139
Cb medulloblastoma
TACCACCACA
(
6
)
2.3
0.0023
Cb medulloblastoma
TTCTCAGATA
(
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAAAAAATAA
(
7
)
2.3
0.0023
P8 GC+1d culture
AAGTATTTTC
(
3
)
2.3
0.0023
P8 GC+1d culture
GCTCACACCT
(
4
)
1.1
0.0011
P8 GC+1d culture
TACCACCACA
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AAAAAAATAA
(
7
)
10.5
0.0105
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GGGCAGGAGG (
6
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AAAAAAATAA
(
7
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAAAAAATAA
(
7
)
18.1
0.0181
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AAAAAAATAA
(
7
)
3.8
0.0038
E12.5 retina
GCTCACACCT
(
4
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AAAAAAATAA
(
7
)
5.5
0.0055
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AAAAAAATAA
(
7
)
10.9
0.0109
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TACCACCACA
(
6
)
5.5
0.0055
E18.5 retina
AAAAAAATAA
(
7
)
3.6
0.0036
E18.5 retina
AAGTATTTTC
(
3
)
1.8
0.0018
E18.5 retina
TTCTCAGATA
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AAAAAAATAA
(
7
)
1.8
0.0018
P2.5 retina
TACCACCACA
(
6
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AAAAAAATAA
(
7
)
9.9
0.0099
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAAAAAATAA
(
7
)
3.3
0.0033
P6.5 retina
AAGTATTTTC
(
3
)
1.7
0.0017
P6.5 retina
GCTCACACCT
(
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TACCACCACA
(
6
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AAAAAAATAA
(
7
)
5.6
0.0056
Adult retinal
TTCTCAGATA
(
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAAAAAATAA
(
7
)
9.6
0.0096
ONL
GGGCAGGAGG (
6
)
1.9
0.0019
