Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.57286
1700034P14Rik
RIKEN cDNA 1700034P14 gene
13
73274
Mm.57286
D230035M11Rik
RIKEN cDNA D230035M11 gene
13
320296
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 105 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGTTTGGGG
(
2
)
4.9
0.0049
P8 Cb GC
GGAAATTAAA (
4
)
4.9
0.0049
P8 Cb GC
TAATAATAAA (
3
)
3.3
0.0033
P8 Cb GC
CTGGTGTGAA (
2
)
1.6
0.0016
P8 Cb GC
GGTAGTATTG (
2
)
1.6
0.0016
P8 Cb GC
TAATTTGCAT (
4
)
1.6
0.0016
P8 Cb GC
TGCTCCCTTA
(
2
)
1.6
0.0016
Cb medulloblastoma
GGAAATTAAA (
4
)
20.8
0.0208
Cb medulloblastoma
GAAAATAAAC
(
7
)
16.2
0.0162
Cb medulloblastoma
CAGTTTGGGG
(
2
)
4.6
0.0046
Cb medulloblastoma
AGAGATGTAT
(
2
)
2.3
0.0023
Cb medulloblastoma
GTGGAAATTC (
6
)
2.3
0.0023
P8 GC+1d culture
CAGTTTGGGG
(
2
)
5.7
0.0057
P8 GC+1d culture
GAAAATAAAC
(
7
)
4.6
0.0046
P8 GC+1d culture
GGAAATTAAA (
4
)
3.4
0.0034
P8 GC+1d culture
AGATTAAGAA (
3
)
2.3
0.0023
P8 GC+1d culture
TAATAATAAA (
3
)
2.3
0.0023
P8 GC+1d culture
CCAGGGGCAC (
6
)
1.1
0.0011
P8 GC+1d culture
CTGGCTCAGA
(
2
)
1.1
0.0011
P8 GC+1d culture
GGTAGTATTG (
2
)
1.1
0.0011
P8 GC+1d culture
TTGGCTAAAA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGTTTGGGG
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
GGAAATTAAA (
4
)
7
0.007
P8 GC+SHH+1d culture
GAAAATAAAC
(
7
)
4.7
0.0047
P8 GC+SHH+1d culture
TAATAATAAA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGGTGTGAA (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGAAATTC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCTCCCTTA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGGCTAAAA (
3
)
1.2
0.0012
3T3 fibroblasts
TAATTTGCAT (
4
)
17.5
0.0175
3T3 fibroblasts
CAGTTTGGGG
(
2
)
3.5
0.0035
3T3 fibroblasts
CTGGTGTGAA (
2
)
3.5
0.0035
E15 cortex
GGAAATTAAA (
4
)
9.9
0.0099
E15 cortex
CCAGGGGCAC (
6
)
4.9
0.0049
E15 cortex
GAAAATAAAC
(
7
)
4.9
0.0049
E15 cortex
TTGGCTAAAA (
3
)
4.9
0.0049
P1 cortex
GGAAATTAAA (
4
)
9.1
0.0091
Hypothalamus
GAAAATAAAC
(
7
)
67
0.067
Hypothalamus
GGAAATTAAA (
4
)
10.9
0.0109
Hypothalamus
CAGTTTGGGG
(
2
)
3.6
0.0036
Hypothalamus
AGAGATGTAT
(
2
)
1.8
0.0018
Hypothalamus
AGATTAAGAA (
3
)
1.8
0.0018
Hypothalamus
GTGGAAATTC (
6
)
1.8
0.0018
Hypothalamus
TAATAATAAA (
3
)
1.8
0.0018
E12.5 retina
CAGTTTGGGG
(
2
)
7.5
0.0075
E12.5 retina
GAAAATAAAC
(
7
)
5.6
0.0056
E12.5 retina
CTGGTGTGAA (
2
)
1.9
0.0019
E12.5 retina
TTGGCTAAAA (
3
)
1.9
0.0019
E14.5 retina
GAAAATAAAC
(
7
)
5.5
0.0055
E14.5 retina
CAGTTTGGGG
(
2
)
3.6
0.0036
E14.5 retina
GGAAATTAAA (
4
)
3.6
0.0036
E14.5 retina
AGAGATGTAT
(
2
)
1.8
0.0018
E14.5 retina
CTGGTGTGAA (
2
)
1.8
0.0018
E14.5 retina
GGTAGTATTG (
2
)
1.8
0.0018
E14.5 retina
GTGGAAATTC (
6
)
1.8
0.0018
E14.5 retina
TGCTCCCTTA
(
2
)
1.8
0.0018
E16.5 retina
CAGTTTGGGG
(
2
)
7.2
0.0072
E16.5 retina
GAAAATAAAC
(
7
)
5.4
0.0054
E16.5 retina
GGAAATTAAA (
4
)
5.4
0.0054
E16.5 retina
CTGGCTCAGA
(
2
)
1.8
0.0018
E16.5 retina
GTGGAAATTC (
6
)
1.8
0.0018
E18.5 retina
CAGTTTGGGG
(
2
)
9.1
0.0091
E18.5 retina
GAAAATAAAC
(
7
)
9.1
0.0091
E18.5 retina
TAATAATAAA (
3
)
3.6
0.0036
E18.5 retina
CTGGCTCAGA
(
2
)
1.8
0.0018
E18.5 retina
GGAAATTAAA (
4
)
1.8
0.0018
E18.5 retina
TGCTCCCTTA
(
2
)
1.8
0.0018
P0.5 retina
CAGTTTGGGG
(
2
)
13.7
0.0137
P0.5 retina
GGAAATTAAA (
4
)
9.8
0.0098
P0.5 retina
GAAAATAAAC
(
7
)
2
0.002
P2.5 retina
CAGTTTGGGG
(
2
)
14.1
0.0141
P2.5 retina
GGAAATTAAA (
4
)
5.3
0.0053
P2.5 retina
GAAAATAAAC
(
7
)
3.5
0.0035
P4.5 retina
GAAAATAAAC
(
7
)
15.9
0.0159
P4.5 retina
GGAAATTAAA (
4
)
13.9
0.0139
P4.5 retina
TAATAATAAA (
3
)
4
0.004
P4.5 retina
CAGTTTGGGG
(
2
)
2
0.002
P4.5 retina
GGTAGTATTG (
2
)
2
0.002
P4.5 retina
TTGGCTAAAA (
3
)
2
0.002
P6.5 retina
CAGTTTGGGG
(
2
)
6.7
0.0067
P6.5 retina
GAAAATAAAC
(
7
)
6.7
0.0067
P6.5 retina
GGAAATTAAA (
4
)
5
0.005
P6.5 retina
TAATAATAAA (
3
)
3.3
0.0033
P6.5 retina
TTGGCTAAAA (
3
)
3.3
0.0033
P6.5 retina
CTGGTGTGAA (
2
)
1.7
0.0017
P6.5 retina
GGTAGTATTG (
2
)
1.7
0.0017
P10.5 crx- retina
CAGTTTGGGG
(
2
)
16.7
0.0167
P10.5 crx- retina
GGAAATTAAA (
4
)
3.7
0.0037
P10.5 crx- retina
TAATAATAAA (
3
)
3.7
0.0037
P10.5 crx- retina
CCAGGGGCAC (
6
)
1.9
0.0019
P10.5 crx- retina
GAAAATAAAC
(
7
)
1.9
0.0019
P10.5 crx- retina
GTGGAAATTC (
6
)
1.9
0.0019
P10.5 crx+ retina
GGAAATTAAA (
4
)
13.5
0.0135
P10.5 crx+ retina
CAGTTTGGGG
(
2
)
5.8
0.0058
P10.5 crx+ retina
GAAAATAAAC
(
7
)
3.8
0.0038
P10.5 crx+ retina
CTGGTGTGAA (
2
)
1.9
0.0019
P10.5 crx+ retina
TGCTCCCTTA
(
2
)
1.9
0.0019
Adult retinal
CAGTTTGGGG
(
2
)
7.4
0.0074
Adult retinal
CCAGGGGCAC (
6
)
1.9
0.0019
Adult retinal
TAATAATAAA (
3
)
1.9
0.0019
ONL
CAGTTTGGGG
(
2
)
3.8
0.0038
ONL
AGATTAAGAA (
3
)
1.9
0.0019
ONL
CTGGTGTGAA (
2
)
1.9
0.0019
ONL
GAAAATAAAC
(
7
)
1.9
0.0019
ONL
TTGGCTAAAA (
3
)
1.9
0.0019
